{"id":"W2004342453","doi":"10.1186/1743-422x-6-41","title":"The genome and proteome of a virulent Escherichia coli O157:H7 bacteriophage closely resembling Salmonella phage Felix O1","year":2009,"lang":"en","type":"article","venue":"Virology Journal","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Canadian Science Centre for Human and Animal Health; Université Laval; Health Canada; Public Health Agency of Canada","funders":"Agriculture and Agri-Food Canada; Brock University; Virginia Polytechnic Institute and State University","keywords":"Biology; Bacteriophage; ORFS; Escherichia coli; Genome; Virulence; Microbiology; Coliphage; Virology; Escherichia; Gene; Genetics; Open reading frame; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005422045,0.0001762879,0.0002307871,0.00005505446,0.0005961102,0.0001116861,0.0003189266,0.000100077,0.0008692817],"category_scores_gemma":[0.00003703051,0.0001263092,0.000101009,0.0001328532,0.0003155115,0.000256922,0.0001402584,0.0005556952,0.0000967309],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008339158,"about_ca_system_score_gemma":0.00001732707,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004518897,"about_ca_topic_score_gemma":0.00002862485,"domain_scores_codex":[0.9986017,0.0001492587,0.0004457247,0.0002387615,0.0001471856,0.0004174014],"domain_scores_gemma":[0.9992287,0.00006355922,0.000316492,0.0002162449,0.0000170784,0.0001579763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001630012,0.00008595367,0.0002226551,0.000002290321,0.00002576387,0.00004815373,0.0002556399,0.00005523048,0.9951504,0.00001249226,0.0002559712,0.003722467],"study_design_scores_gemma":[0.001267878,0.001317293,0.8924075,0.00002892842,0.0000750652,0.001673789,0.0001449219,0.0003163201,0.05503391,0.0009101758,0.04648291,0.0003413015],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961998,0.0004414019,0.0002623587,0.001535786,0.0002377347,0.0002346012,0.000009652503,0.00001422016,0.001064419],"genre_scores_gemma":[0.9968295,0.0007911625,0.0009952782,0.0005357275,0.0001447547,0.000006263575,0.000001583921,0.00001430985,0.000681453],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9401165,"threshold_uncertainty_score":0.9518025,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007348782423095042,"score_gpt":0.2319073049955163,"score_spread":0.2245585225724213,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}