{"id":"W2005058616","doi":"10.1186/1471-2180-9-223","title":"Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes","year":2009,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":175,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Health Canada; Akademie Věd České Republiky; University of Nottingham; Trent University; Micropathology; Nottingham Trent University","keywords":"Biology; Cronobacter sakazakii; Multilocus sequence typing; Cronobacter; Parasitology; Typing; Genetics; Microbiology; Sequence (biology); Computational biology; Evolutionary biology; Genotype; Enterobacter; Bacteria; Gene; Zoology; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003688844,0.0002831166,0.0002208035,0.001081656,0.000191474,0.0003318052,0.0002101099,0.0002870872,0.0004113672],"category_scores_gemma":[0.002295535,0.000118018,0.000188434,0.0006480408,0.0002561192,0.0002289048,0.0003200754,0.0001951407,0.0001110722],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004055313,"about_ca_system_score_gemma":0.0002621556,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005956405,"about_ca_topic_score_gemma":0.005738008,"domain_scores_codex":[0.999562,0.00005453109,0.00007449608,0.00009419216,0.0001321418,0.00008273471],"domain_scores_gemma":[0.9983554,0.000281305,0.0006585218,0.00008859753,0.0004091886,0.0002069392],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009631834,0.0001294945,0.7900316,0.0001652319,0.00009005224,0.000592692,0.0004454741,0.0003117337,0.1844511,0.00007309649,0.0001057445,0.02264068],"study_design_scores_gemma":[0.0000166843,0.0005065394,0.9793338,0.00002257041,0.00005529558,0.001999083,0.0002923123,0.0005157833,0.01674649,0.0000287634,0.0004738102,0.000008929252],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992387,0.0002635218,0.0002078344,0.00001026973,0.000003861859,0.0000126329,0.00007346327,0.000002862971,0.0001869118],"genre_scores_gemma":[0.9987746,0.0001103409,0.0006882719,0.000008646816,0.000003962178,0.000007863787,0.0003016299,0.000001233257,0.0001034285],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005956405,"threshold_uncertainty_score":0.0118435,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02541922456611405,"score_gpt":0.3029534996811386,"score_spread":0.2775342751150245,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}