{"id":"W2005683571","doi":"10.1021/cb300608x","title":"Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium","year":2013,"lang":"en","type":"article","venue":"ACS Chemical Biology","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":109,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; National Institute of General Medical Sciences","keywords":"Peroxidase; Manganese; Chemistry; Heme; Peroxide; Divalent; Oxidizing agent; Lignin peroxidase; Bacteria; Lignin; Manganese peroxidase; Enzyme; Biochemistry; Stereochemistry; Organic chemistry; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008064901,0.0001578853,0.0002675207,0.00001145115,0.00003751475,0.00001939591,0.0002777116,0.0002945367,0.0005586781],"category_scores_gemma":[0.000237837,0.000064242,0.00008095925,0.0001829862,0.0001299281,0.000133844,0.0001305798,0.0001756669,0.00009699373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000270714,"about_ca_system_score_gemma":0.000007086931,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00209191,"about_ca_topic_score_gemma":0.00006241138,"domain_scores_codex":[0.9989656,0.00007547093,0.0002342757,0.0003506362,0.00007233832,0.0003016499],"domain_scores_gemma":[0.9990779,0.000490427,0.000147554,0.00009797164,0.0000811287,0.0001049891],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002393313,0.00007892882,0.001552739,0.000003686671,0.00001574676,5.480958e-7,0.00002775571,1.49498e-8,0.9766663,0.00001724979,0.0001326651,0.02148045],"study_design_scores_gemma":[0.0001815689,0.0001185264,0.02468708,0.000008586953,0.00001166644,0.000001735087,0.00004555227,0.00008241372,0.9738979,0.0005160645,0.0002992596,0.0001496969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983302,0.00006640471,0.000003976962,0.001086681,0.00008480407,0.0002037261,0.00007130093,0.00006815582,0.0000847394],"genre_scores_gemma":[0.998856,0.00001840915,0.0002754893,0.0001939565,0.0002021986,0.00004084671,0.0003795045,0.000001486404,0.00003207202],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02313434,"threshold_uncertainty_score":0.6117133,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01215858795236667,"score_gpt":0.2061556402404275,"score_spread":0.1939970522880608,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}