{"id":"W2005879027","doi":"10.1371/journal.ppat.1000902","title":"Muc2 Protects against Lethal Infectious Colitis by Disassociating Pathogenic and Commensal Bacteria from the Colonic Mucosa","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":627,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia, Okanagan Campus; University of British Columbia; University of Calgary; Child and Family Research Institute","funders":"Canadian Institutes of Health Research; CH.I.L.D. Foundation; Michael Smith Health Research BC; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Mucin; Citrobacter rodentium; Mucin 2; Microbiology; Biology; Mucus; Pathogen; Intestinal mucosa; Secretion; Colitis; Immunology; Medicine; Internal medicine; Gene expression; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002401738,0.0002135696,0.0002077601,0.00001391841,0.0003748965,0.00007110473,0.000172692,0.0002939079,0.00003368916],"category_scores_gemma":[0.0002175892,0.0001783022,0.0000783406,0.0000634186,0.0001195719,0.000004718805,0.0001765883,0.0003694185,0.00001399752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002501167,"about_ca_system_score_gemma":0.0001106403,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001484281,"about_ca_topic_score_gemma":0.00108195,"domain_scores_codex":[0.9986365,0.0001878973,0.0002323386,0.0004102991,0.0001038973,0.0004290734],"domain_scores_gemma":[0.9992005,0.00006984278,0.0001521252,0.0003697318,0.00006941737,0.0001383882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002136101,0.00007388545,0.02369038,0.00001369211,0.00006058091,0.000005783444,0.0003196224,8.66689e-8,0.9729058,0.00001300118,0.002002962,0.0008928915],"study_design_scores_gemma":[0.003565218,0.0009509618,0.3896408,0.00007294484,0.0001686736,0.00009272048,0.0005240325,0.0001154252,0.5197845,0.0001744783,0.08364375,0.001266535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968845,0.0002470704,0.00001416746,0.000484381,0.0002065884,0.0005631128,0.001361029,0.0000331689,0.0002059333],"genre_scores_gemma":[0.9969385,0.0001369466,0.0002595478,0.001253158,0.0004071155,0.00007838744,0.0008206844,0.00004041556,0.00006522817],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4531213,"threshold_uncertainty_score":0.7270953,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006114615626470025,"score_gpt":0.2156085923247471,"score_spread":0.209493976698277,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}