{"id":"W2005885786","doi":"10.1128/aem.01771-08","title":"Metabolomic Investigation of the Bacterial Response to a Metal Challenge","year":2008,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Arsenic contamination and mitigation","field":"Environmental Science","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Metabolomics Innovation Centre; University of Calgary","funders":"","keywords":"Metabolomics; Glutathione; Betaine; Biology; Biochemistry; Oxidative stress; Metabolic pathway; Metabolism; Chemistry; Microbiology; Enzyme; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009819515,0.0003758674,0.0004594338,0.000378188,0.0002041619,0.0003384642,0.0001546968,0.0003921403,0.0006602099],"category_scores_gemma":[0.0002545459,0.0001078453,0.0003109883,0.0004844338,0.0001469634,0.0002057375,0.0002040622,0.0002678968,0.0002556006],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000169779,"about_ca_system_score_gemma":0.0002159342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001804951,"about_ca_topic_score_gemma":0.001139334,"domain_scores_codex":[0.9998341,0.00002119366,0.00001070429,0.00004189375,0.00005621224,0.00003589728],"domain_scores_gemma":[0.9998578,0.0000221285,0.00002991654,0.00001276668,0.00004872707,0.00002869386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001000096,0.0000120536,0.0007418241,0.00002188978,0.000005803323,0.00003481895,0.00002273621,0.00002942352,0.9982998,0.000009784022,0.000009770138,0.0007121128],"study_design_scores_gemma":[0.000005923369,0.0006546223,0.05873461,0.00000665029,0.00004866248,0.0004130831,0.0003041239,0.001268849,0.937579,0.00007017441,0.0008952487,0.00001912809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970533,0.0002037685,0.001005216,0.00005838722,0.000007022745,0.00002017777,0.001191959,0.00003545283,0.000424626],"genre_scores_gemma":[0.9939448,0.0002853488,0.002093559,0.00004988286,0.000007422123,0.00003559705,0.002397087,0.00001784848,0.001168419],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001804951,"threshold_uncertainty_score":0.003588855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006924084422907789,"score_gpt":0.1671909496347663,"score_spread":0.1602668652118585,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}