{"id":"W2005897903","doi":"10.1038/ismej.2013.164","title":"In and out: an analysis of epibiotic vs periplasmic bacterial predators","year":2013,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Russian Academy of Sciences; Natural Sciences and Engineering Research Council of Canada; Israel Science Foundation","keywords":"Periplasmic space; Biology; Bdellovibrio; Predation; Major facilitator superfamily; Microbiology; Gene; Ecology; Genetics; Escherichia coli; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001412336,0.00006093076,0.000128256,0.00006197285,0.00007566962,0.00007069777,0.0001404711,0.00002722914,0.03731981],"category_scores_gemma":[0.00001115281,0.00003946066,0.00005169638,0.0001333283,0.00009779248,0.0004571596,0.00006191216,0.000139078,0.00009114471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005007991,"about_ca_system_score_gemma":0.000004986814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008094836,"about_ca_topic_score_gemma":0.0009378333,"domain_scores_codex":[0.999473,0.00006741318,0.0001896928,0.00008314373,0.00006649603,0.0001202237],"domain_scores_gemma":[0.9996921,0.00002630829,0.0001004586,0.0001139094,0.000005489562,0.00006176563],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003573033,0.00011324,0.02163678,0.000002079322,0.0001315772,0.000003168755,0.004549348,0.0005608611,0.9670568,0.000004981532,0.003235845,0.002669643],"study_design_scores_gemma":[0.0001487331,0.00007345138,0.9937206,0.000007014347,0.00009644288,0.00005053617,0.0004033761,0.001647683,0.002021971,0.00006433555,0.0017001,0.00006574555],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989834,0.000003889685,0.00002222359,0.0004944119,0.0001738634,0.0000556925,0.00001654916,0.000002241203,0.0002477589],"genre_scores_gemma":[0.9992026,0.00002025017,0.0001508244,0.000101854,0.0000452016,0.00000114656,0.000002829426,0.000004277724,0.0004710161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9720838,"threshold_uncertainty_score":0.9635602,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007296292200469872,"score_gpt":0.2334524325654361,"score_spread":0.2261561403649662,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}