{"id":"W2006300041","doi":"10.1371/journal.pone.0011981","title":"Exon-Level Transcriptome Profiling in Murine Breast Cancer Reveals Splicing Changes Specific to Tumors with Different Metastatic Abilities","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; McGill Genome Centre","funders":"Canadian Institutes of Health Research; Genome Canada","keywords":"Exon; Alternative splicing; Biology; CD44; Breast cancer; Cancer research; Gene expression profiling; Transcriptome; Metastasis; RNA splicing; Gene isoform; Phenotype; Gene; Cancer; Intron; Genetics; Gene expression; Cell; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001255082,0.0001656245,0.0001672078,0.0003507702,0.00009572842,0.0001583272,0.0001206348,0.0002080413,0.0005042913],"category_scores_gemma":[0.0001359447,0.0001386568,0.0002734238,0.0002295614,0.0001300869,0.00009586005,0.0001171315,0.0002569204,0.0003072201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002104127,"about_ca_system_score_gemma":0.00008796515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003822103,"about_ca_topic_score_gemma":0.0006822762,"domain_scores_codex":[0.9998715,0.00001291517,0.000008922742,0.00004333754,0.00003874462,0.00002460474],"domain_scores_gemma":[0.9998752,0.00003212237,0.00004603214,0.00001285632,0.00001862717,0.00001523658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008861726,0.000008611729,0.001279507,0.0000148819,0.000005871434,0.00001446822,0.00001107702,0.00006077433,0.9975888,0.00002051428,0.00001703408,0.0008899563],"study_design_scores_gemma":[0.00002281879,0.0005556585,0.1875481,0.00001203249,0.00008942193,0.0007455613,0.00006249119,0.003334657,0.8052547,0.0001597308,0.002202526,0.00001217825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951391,0.0005072046,0.002441448,0.00002320802,0.000004686467,0.00001218375,0.00145421,0.00003950854,0.0003783109],"genre_scores_gemma":[0.9848691,0.0006632601,0.007204294,0.00007569421,0.0000067952,0.00007013494,0.005321555,0.00004784475,0.001741235],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005042913,"threshold_uncertainty_score":0.00168699,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05208755615523942,"score_gpt":0.2693909704052672,"score_spread":0.2173034142500278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}