{"id":"W2006436416","doi":"10.1038/nsmb.2496","title":"Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA","year":2013,"lang":"en","type":"article","venue":"Nature Structural & Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Derepression; Biology; Enhancer; Endogenous retrovirus; Long terminal repeat; Retrotransposon; Gene; Repressor; Genetics; Gene expression; Psychological repression; Transposable element; Genome","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002452196,0.0003987384,0.0003361431,0.0003505915,0.0004369496,0.001266178,0.0004813585,0.0004744536,0.004162131],"category_scores_gemma":[0.0002629315,0.0003000277,0.0005602745,0.0002248256,0.000455779,0.0003608313,0.0004268578,0.001449844,0.002810304],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009169722,"about_ca_system_score_gemma":0.0004101447,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008823512,"about_ca_topic_score_gemma":0.002189519,"domain_scores_codex":[0.9996156,0.00004723074,0.00002436322,0.00009981445,0.00009772548,0.0001153413],"domain_scores_gemma":[0.9996065,0.00006474793,0.00007194156,0.00008494267,0.000064163,0.0001076715],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006382922,0.00001103447,0.000119894,0.00001196043,0.000002627158,0.0000309119,0.00001245049,0.00003104288,0.9986652,0.0001525411,0.00006499497,0.0008334726],"study_design_scores_gemma":[0.000009181894,0.00006723061,0.00206307,0.000003887836,0.000004560581,0.00008815118,0.00005668592,0.0006579329,0.9954927,0.0001022352,0.001449096,0.000005401737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870065,0.001291632,0.005466994,0.000150861,0.000117469,0.00003501075,0.0006981304,0.0004832247,0.004750226],"genre_scores_gemma":[0.9844813,0.0002146709,0.00399894,0.0001198389,0.00002192681,0.00003256425,0.001372145,0.0002134763,0.009545064],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004162131,"threshold_uncertainty_score":0.0139237,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004114783659224872,"score_gpt":0.2575756497600034,"score_spread":0.2534608661007785,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}