{"id":"W2006489296","doi":"10.1097/jto.0000000000000239","title":"Canadian Anaplastic Lymphoma Kinase Study: A Model for Multicenter Standardization and Optimization of ALK Testing in Lung Cancer","year":2014,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval; Pfizer (Canada); Centre Hospitalier de l’Université de Montréal; McGill University; London Health Sciences Centre; Princess Margaret Cancer Centre; Health Sciences North; BC Cancer Agency; Queen Elizabeth II Health Sciences Centre; University Health Network; University of Alberta; Dalhousie University; University of Ottawa; McGill University Health Centre; Jewish General Hospital; Health Sciences Centre; University of Calgary; Ottawa Hospital; McMaster University Medical Centre; University of Alberta Hospital; University of Toronto; University of British Columbia; Alberta Hospital Edmonton","funders":"","keywords":"Medicine; Anaplastic lymphoma kinase; Immunohistochemistry; Lung cancer; Intraclass correlation; Fluorescence in situ hybridization; Crizotinib; Oncology; Internal medicine; Pathology; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.05585713,0.00149713,0.001999559,0.001656637,0.003010784,0.003786045,0.004379828,0.001507274,0.00325566],"category_scores_gemma":[0.0566895,0.0007554315,0.002360468,0.00541245,0.001575644,0.001431174,0.003090404,0.002277405,0.0006498642],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.06485731,"about_ca_system_score_gemma":0.2151005,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9308048,"about_ca_topic_score_gemma":0.9575627,"domain_scores_codex":[0.961596,0.02429871,0.001389422,0.00288136,0.006742798,0.003091633],"domain_scores_gemma":[0.9694494,0.0051214,0.003208293,0.003894595,0.01277652,0.005549729],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.01810006,0.0006744003,0.3228889,0.0009632665,0.005117366,0.0002037167,0.0007485497,0.04715603,0.001032163,0.06095722,0.4127096,0.1294488],"study_design_scores_gemma":[0.02169607,0.002810495,0.6428136,0.001784909,0.006321822,0.0002168573,0.00149778,0.1037509,0.001783011,0.02185106,0.194779,0.0006944769],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.3089726,0.01348644,0.0856849,0.1811732,0.005292526,0.03034012,0.2421394,0.002814546,0.1300963],"genre_scores_gemma":[0.7919284,0.002320987,0.1158476,0.01532092,0.0005880592,0.009659791,0.05712178,0.0004187076,0.006793699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9980004,"threshold_uncertainty_score":0.4705749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02149645302264733,"score_gpt":0.4244815119929524,"score_spread":0.402985058970305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}