{"id":"W2006826092","doi":"10.1021/cb400505a","title":"Breaking Down Lignin to High-Value Chemicals: The Conversion of Lignocellulose to Vanillin in a Gene Deletion Mutant of <i>Rhodococcus jostii</i> RHA1","year":2013,"lang":"en","type":"article","venue":"ACS Chemical Biology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":280,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Vanillin; Lignin; Chemistry; Ferulic acid; Biochemistry; Mutant; Food science; Organic chemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002722259,0.0003187668,0.0005130819,0.00007396781,0.00002952697,0.00001029917,0.0007093652,0.0005965288,0.00003978227],"category_scores_gemma":[0.0007325987,0.0002253962,0.0001393645,0.000469551,0.0003230293,0.000007017804,0.0006144537,0.0002365603,0.00003884614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003629156,"about_ca_system_score_gemma":0.00006131773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003117007,"about_ca_topic_score_gemma":0.000002686367,"domain_scores_codex":[0.9977875,0.00008185841,0.0007444867,0.0007013513,0.000172916,0.0005118779],"domain_scores_gemma":[0.9986369,0.000157321,0.0002070878,0.000497079,0.0002796268,0.0002219787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002235425,0.0001836797,0.0007829749,0.0000813842,0.00003583173,8.58738e-7,0.0000425925,0.000006886294,0.9959288,0.00007702029,0.001731861,0.0009045693],"study_design_scores_gemma":[0.0005915675,0.0003284232,0.0001335696,0.00006177577,0.00002353579,0.000009616135,0.00003930858,0.0000158039,0.9965268,0.0006573374,0.001313193,0.0002990235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969447,0.0004543628,0.00025383,0.001460078,0.00006789328,0.0005895193,0.00006510685,0.00001569243,0.0001487938],"genre_scores_gemma":[0.9952629,0.0001378799,0.001945938,0.002114495,0.0001782278,0.0000928359,0.0002232421,0.00002488417,0.00001966129],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001692108,"threshold_uncertainty_score":0.9191391,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006119951100927588,"score_gpt":0.229192849510497,"score_spread":0.2230728984095694,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}