{"id":"W2007206791","doi":"10.1080/09670262.2013.767943","title":"Resolving species diversity in the red algal genus <i>Callophyllis</i> (Kallymeniaceae, Gigartinales) in Canada using molecular assisted alpha taxonomy","year":2013,"lang":"en","type":"article","venue":"European Journal of Phycology","topic":"Marine and coastal plant biology","field":"Earth and Planetary Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Biology; DNA barcoding; Internal transcribed spacer; Taxonomy (biology); Cytochrome c oxidase subunit I; Botany; Gigartinales; Ribosomal DNA; Ribosomal RNA; Species complex; Zoology; Evolutionary biology; Phylogenetics; Algae; Gene; Genetics; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000412436,0.0002285995,0.0002266281,0.002867258,0.002706094,0.00104206,0.0005660561,0.0002224106,0.0004708883],"category_scores_gemma":[0.0007331267,0.0001794734,0.0002342106,0.002751092,0.0006370279,0.0003018481,0.0006018569,0.0003246033,0.00008707217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.008923925,"about_ca_system_score_gemma":0.007129825,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9462757,"about_ca_topic_score_gemma":0.9813759,"domain_scores_codex":[0.9995629,0.00002049799,0.00002099462,0.0000979253,0.0001891607,0.0001085881],"domain_scores_gemma":[0.9995646,0.00004133199,0.00007685371,0.00001969711,0.0002213223,0.00007621033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001790064,0.00002925081,0.8375287,0.0001778552,0.0001312052,0.0005497012,0.007219018,0.0007352255,0.06407715,0.0006296717,0.0007805958,0.08796265],"study_design_scores_gemma":[0.000003068197,0.00001856801,0.9904288,0.00003031809,0.00003491731,0.000187146,0.002741528,0.0004629636,0.001681699,0.00006090598,0.004334177,0.00001593097],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960219,0.000779815,0.0003128485,0.00004956246,0.000004547835,0.0000198557,0.0003937288,0.00001688083,0.00240086],"genre_scores_gemma":[0.9963194,0.0005913614,0.001807698,0.00005138648,0.000001854549,0.000009881467,0.0005388889,0.000006245813,0.0006733482],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05372435,"threshold_uncertainty_score":0.1080815,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03231540197561851,"score_gpt":0.1775065855586175,"score_spread":0.1451911835829989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}