{"id":"W2007787730","doi":"10.1371/journal.pone.0019521","title":"Comparative Structural Analysis of Lipid Binding START Domains","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":133,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Knut och Alice Wallenbergs Stiftelse; Karolinska Institutet; Academy of Finland; Stiftelsen för Strategisk Forskning; Ontario Genomics Institute; Ontario Genomics; Genome Canada; GlaxoSmithKline; Ontario Innovation Trust; European Synchrotron Radiation Facility; Wellcome Trust","keywords":"Plant lipid transfer proteins; Computational biology; ENCODE; Biology; Ligand (biochemistry); Bioinformatics; Gene; Genetics; Receptor","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000491162,0.00007270716,0.0002075596,0.00007699276,0.0000299285,0.000002882489,0.00007571535,0.00005765573,0.000237696],"category_scores_gemma":[0.000003727127,0.00006863519,0.00009755147,0.0001656447,0.00004907707,0.000002264074,0.00001489306,0.00003741797,0.000003456886],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004554494,"about_ca_system_score_gemma":0.00001146962,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002403013,"about_ca_topic_score_gemma":0.0001141939,"domain_scores_codex":[0.999486,0.00001869357,0.0001414179,0.0001470179,0.000106784,0.0001000765],"domain_scores_gemma":[0.9996746,0.000002741099,0.00006440208,0.0001631786,0.00005781109,0.00003732085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007091904,0.0001186903,0.07173865,0.00001135353,0.001621436,6.629074e-7,0.0005332009,0.000006402256,0.9258364,0.00005216445,0.000002534651,0.000007534482],"study_design_scores_gemma":[0.0001895078,0.0001507937,0.06211852,0.000008204229,0.0008538464,1.499834e-7,0.0001202621,0.0003065127,0.9360709,0.00001443376,0.00006837317,0.00009854163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974126,0.00007887874,0.0009230532,0.000003980876,0.00001497796,0.00007315553,0.00004287929,0.000005403988,0.001445068],"genre_scores_gemma":[0.9965585,0.00003039548,0.00125925,0.00001007718,0.00004047808,0.000003037012,0.001944674,0.000005191786,0.0001484336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01023441,"threshold_uncertainty_score":0.2798862,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05908322097183597,"score_gpt":0.2402027441982445,"score_spread":0.1811195232264085,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}