{"id":"W2007819361","doi":"10.1089/aid.2007.0080","title":"<i>Short Communication:</i> Identification of a Novel HIV Type 1 Subtype H/J Recombinant in Canada with Discordant HIV Viral Load (RNA) Values in Three Different Commercial Assays","year":2007,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Hip and Knee Clinic; Public Health Agency of Canada","funders":"Public Health Agency","keywords":"Virology; Recombinant DNA; Viral load; Biology; Lentivirus; Group-specific antigen; DNA sequencing; Gene; Human immunodeficiency virus (HIV); Phylogenetic tree; Genetic diversity; RNA; Viral disease; Genetics; Medicine; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001544647,0.0001783603,0.0003735549,0.0003645965,0.0002961029,0.00003476399,0.0004087893,0.00007113341,0.00006093549],"category_scores_gemma":[0.000141742,0.0001342224,0.00002912951,0.000390569,0.0006225511,0.0001246502,0.0002198148,0.0006850912,0.00002018836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00073155,"about_ca_system_score_gemma":0.0006809223,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4210605,"about_ca_topic_score_gemma":0.9393629,"domain_scores_codex":[0.9978248,0.0003036468,0.0005037508,0.0003355943,0.0003064318,0.0007257434],"domain_scores_gemma":[0.9985642,0.0004670025,0.0000851438,0.0005334296,0.0002689891,0.00008117192],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001144888,0.0007993628,0.947945,0.00003536779,0.00008460709,0.00004033839,0.0002242657,0.000001169474,0.0446556,0.002396426,0.0007888694,0.001884129],"study_design_scores_gemma":[0.002211144,0.001071315,0.967822,0.0001160653,0.0000104446,0.000009845489,0.0005881335,0.000001376533,0.02729214,0.0003983813,0.0003358413,0.0001432764],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973426,0.001235195,0.00004289733,0.000147169,0.00004796061,0.0004649945,0.00009019247,0.000009184672,0.0006198316],"genre_scores_gemma":[0.9986977,0.0003150351,0.00004112324,0.00001216449,0.000009517791,0.00003878909,0.0002526693,0.00001687691,0.0006161541],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5183023,"threshold_uncertainty_score":0.5827947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05842908577363123,"score_gpt":0.3315685189855779,"score_spread":0.2731394332119467,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}