{"id":"W2008233061","doi":"10.1016/j.ygeno.2013.04.007","title":"Clinical genomics information management software linking cancer genome sequence and clinical decisions","year":2013,"lang":"en","type":"article","venue":"Genomics","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"Princess Margaret Cancer Centre; Queen's University; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Ontario Ministry of Research and Innovation; Ontario Ministry of Research, Innovation and Science; Princess Margaret Cancer Foundation; Cancer Care Ontario","keywords":"Genomics; Software; Personal genomics; Computer science; Process (computing); DNA sequencing; Data science; Biology; Bioinformatics; Computational biology; Genome; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002961477,0.001189126,0.0008564309,0.004319019,0.0005393082,0.003330149,0.001649392,0.001119828,0.03811318],"category_scores_gemma":[0.01958106,0.0008768949,0.0007521263,0.003379227,0.0003880308,0.001761536,0.002010652,0.001395625,0.009100706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001334597,"about_ca_system_score_gemma":0.002181415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004761984,"about_ca_topic_score_gemma":0.003500394,"domain_scores_codex":[0.998966,0.0002087328,0.0001902113,0.0002500349,0.0003145615,0.00007061928],"domain_scores_gemma":[0.9865634,0.009418477,0.001037277,0.001489407,0.001012105,0.0004792576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002235711,0.0006360337,0.02960826,0.001074602,0.0003555509,0.001152549,0.001001539,0.01522703,0.0062126,0.01601991,0.4509757,0.4755006],"study_design_scores_gemma":[0.001786958,0.0003706199,0.02461564,0.0007083041,0.0006404783,0.002374594,0.0004161634,0.2632375,0.06425741,0.07912527,0.5620839,0.0003830486],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.02798799,0.001184129,0.3504607,0.005392597,0.0005622718,0.0009871763,0.08023112,0.5015572,0.03163675],"genre_scores_gemma":[0.4323806,0.00282755,0.2956585,0.0087569,0.00101369,0.002293128,0.168062,0.05069767,0.03830996],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.03811318,"threshold_uncertainty_score":0.1275012,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0312802503984551,"score_gpt":0.3242733391721115,"score_spread":0.2929930887736564,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}