{"id":"W2008362943","doi":"10.1002/bies.200900117","title":"Sizing up the genomic footprint of endosymbiosis","year":2009,"lang":"en","type":"review","venue":"BioEssays","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research","keywords":"Endosymbiosis; Plastid; Biology; Evolutionary biology; Nuclear gene; Genome; Phylogenomics; Dinoflagellate; Gene; Chloroplast; Genetics; Phylogenetics; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001928846,0.0002447449,0.0005249947,0.00004008698,0.00009074254,0.00001634749,0.0006457566,0.000324564,0.00001419889],"category_scores_gemma":[0.00003415376,0.0001712733,0.0004984049,0.00008646628,0.0001003519,6.326601e-7,0.0002896446,0.0001502204,0.00002336653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001918846,"about_ca_system_score_gemma":0.0001374174,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001763705,"about_ca_topic_score_gemma":0.00000605909,"domain_scores_codex":[0.9989851,0.0001192366,0.0002768961,0.0003185459,0.00009734447,0.0002028862],"domain_scores_gemma":[0.9990758,0.00002298322,0.0002517524,0.0005664942,0.00003706794,0.00004591427],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001143549,0.00004856751,0.00008189891,0.002355055,0.0003078419,0.000003356605,0.0000283318,4.163998e-7,0.002958925,0.0005567786,0.0006324218,0.993015],"study_design_scores_gemma":[0.00009543433,0.00009080225,0.00006769726,0.0005890962,0.0002819256,0.0000153017,0.00001191486,1.124002e-7,0.003342436,0.00004870578,0.995243,0.0002135878],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001716228,0.9971507,0.00004075117,0.00001744772,0.0002150898,0.0004068083,0.0001664571,0.000006839718,0.001824244],"genre_scores_gemma":[0.002367664,0.9967347,0.00008965886,0.00004656105,0.0002385253,0.00001610202,0.0001671051,0.00001890242,0.0003207626],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9946105,"threshold_uncertainty_score":0.6984324,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04622451512183215,"score_gpt":0.2971691760234945,"score_spread":0.2509446609016623,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}