{"id":"W2008533804","doi":"10.1167/iovs.13-12631","title":"Extremely Complex Populations of Small RNAs in the Mouse Retina and RPE/Choroid","year":2013,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Queen's University; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Science Foundation Ireland; Queen's University Belfast","keywords":"Biology; Retina; microRNA; Retinal pigment epithelium; Small RNA; Drosha; Choroid; RNA; Deep sequencing; MiRBase; Genetics; Computational biology; Genome; Gene; Neuroscience; RNA interference","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0004531312,0.000122818,0.0001230733,0.00008435971,0.0001421871,0.00002934303,0.0003523684,0.00007944443,0.00004293013],"category_scores_gemma":[0.0004016209,0.00009614295,0.00002849912,0.0003561362,0.002730482,0.000018724,0.0001638681,0.00008276994,0.000005989425],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001901903,"about_ca_system_score_gemma":0.0001086653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002786058,"about_ca_topic_score_gemma":0.00002239338,"domain_scores_codex":[0.998791,0.0002039626,0.0002378707,0.0003680579,0.0001576549,0.0002414633],"domain_scores_gemma":[0.9993223,0.00003108461,0.0001409308,0.0002490986,0.0001581109,0.00009850553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000006501708,0.00004851484,0.0565029,0.000005897704,0.000003271922,0.000002562283,0.0002112875,0.00003059375,0.9427611,0.0002182789,0.00008305717,0.0001260978],"study_design_scores_gemma":[0.000135288,0.0001724626,0.669627,0.000007248247,0.000004396375,0.00005503654,0.0001630781,0.0004225887,0.3268521,0.002432118,0.00003686418,0.0000918482],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985934,0.0001241108,0.00001429642,0.0003605537,0.00002618893,0.0003563573,0.000007339811,0.000004073965,0.0005137093],"genre_scores_gemma":[0.9974797,0.000003503143,0.002202002,0.0001504216,0.00002704228,0.00003949823,0.00003360158,0.000007082054,0.00005712829],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.615909,"threshold_uncertainty_score":0.9999835,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0711707041275364,"score_gpt":0.3305819854019849,"score_spread":0.2594112812744485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}