{"id":"W2008711375","doi":"10.1101/gr.716103","title":"Regulatory Roles of Conserved Intergenic Domains in Vertebrate <i>Dlx</i> Bigene Clusters","year":2003,"lang":"en","type":"article","venue":"Genome Research","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":182,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Université Libanaise; Canadian Institutes of Health Research; March of Dimes Foundation","keywords":"Biology; Genetics; Intergenic region; Enhancer; DLX5; Homeobox; Evolutionary biology; Regulatory sequence; Zebrafish; Vertebrate; Conserved sequence; Chordate; Gene; Genome; Regulation of gene expression; Transcription factor; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001201811,0.0002327907,0.0002085356,0.0004976983,0.0002626509,0.000318329,0.0002637282,0.0002009114,0.0007716116],"category_scores_gemma":[0.0002047916,0.0001909593,0.000234587,0.0002256809,0.0002567495,0.0002221898,0.0004886804,0.000330501,0.000274706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00030191,"about_ca_system_score_gemma":0.0001479681,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008960903,"about_ca_topic_score_gemma":0.001838927,"domain_scores_codex":[0.9997781,0.00002298522,0.00001190822,0.0001075153,0.00004020072,0.00003936722],"domain_scores_gemma":[0.9998003,0.00004187484,0.0000631211,0.00001669181,0.00001773016,0.00006029402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002131301,0.00001568198,0.004610241,0.00005003565,0.00001015851,0.0001451033,0.0001284934,0.0001521694,0.9910472,0.0003549458,0.00003394944,0.00323886],"study_design_scores_gemma":[0.00008388887,0.0003762971,0.5504475,0.00007704114,0.000100035,0.001335826,0.0004845526,0.00394096,0.4329263,0.0009281579,0.009250359,0.00004919294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956868,0.001105471,0.001771984,0.00002179687,0.000006446676,0.000008224841,0.000147801,0.00003866114,0.001212771],"genre_scores_gemma":[0.9970137,0.0001955973,0.001328084,0.0000391039,0.000004268189,0.00001090249,0.0005013305,0.0000128051,0.0008942623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008960903,"threshold_uncertainty_score":0.002581298,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02546888739867591,"score_gpt":0.3043488715129963,"score_spread":0.2788799841143204,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}