{"id":"W2008872906","doi":"10.1371/journal.pone.0055722","title":"N-Glycoproteome of E14.Tg2a Mouse Embryonic Stem Cells","year":2013,"lang":"nl","type":"article","venue":"PLoS ONE","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; National Institute of General Medical Sciences; National Institute on Drug Abuse; Simon Fraser University","keywords":"Glycosylation; Embryonic stem cell; Proteome; Glycoprotein; Biology; Cell biology; Stem cell; Gene; HEK 293 cells; Transmembrane protein; Extracellular matrix; Computational biology; Chemistry; Receptor; Molecular biology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001062542,0.0003432524,0.0001868645,0.0003806872,0.0001015409,0.0002141861,0.0001274155,0.000199388,0.0006140358],"category_scores_gemma":[0.00009618777,0.00009675416,0.0001756243,0.0002559837,0.0001258833,0.0001501084,0.0001718699,0.0002821726,0.0002604441],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001347252,"about_ca_system_score_gemma":0.0001294985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007467192,"about_ca_topic_score_gemma":0.0008434179,"domain_scores_codex":[0.9999298,0.000007729801,0.000008148414,0.00002041938,0.00002274868,0.00001114094],"domain_scores_gemma":[0.9999278,0.00001164229,0.00001695162,0.000008573931,0.0000137076,0.00002141137],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000576401,0.000004080185,0.0005420977,0.000009069794,0.00000323076,0.00004302711,0.000009374672,0.00001839549,0.998893,0.00002641645,0.00001147011,0.0003822616],"study_design_scores_gemma":[0.00001133069,0.0002290337,0.1016098,0.000008470301,0.00003580787,0.000642009,0.0001121453,0.001236888,0.892926,0.0001174537,0.003056015,0.00001513893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993651,0.0004160122,0.002129195,0.00003614549,0.000008435791,0.00001607197,0.002630202,0.00002845641,0.001084563],"genre_scores_gemma":[0.9746368,0.001238567,0.006485741,0.0001382701,0.00001053627,0.00008355945,0.01112141,0.00007395879,0.006211217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007467192,"threshold_uncertainty_score":0.002054214,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03135115644955964,"score_gpt":0.2319168486822067,"score_spread":0.2005656922326471,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}