{"id":"W2009481379","doi":"10.1002/pros.21106","title":"Genome‐wide linkage analysis of 1,233 prostate cancer pedigrees from the International Consortium for prostate cancer Genetics using novel sumLINK and sumLOD analyses","year":2010,"lang":"en","type":"article","venue":"The Prostate","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"U.S. National Library of Medicine; National Cancer Institute; National Human Genome Research Institute; Medical Research Council; U.S. Public Health Service; National Institutes of Health; Universität Ulm; Deutsche Krebshilfe; National Health and Medical Research Council; Pirkanmaan Sairaanhoitopiiri; Cancer Research UK; National Institute on Minority Health and Health Disparities; National Center for Research Resources; Tampereen Yliopisto; U.S. Department of Defense; Huntsman Cancer Institute; University of Utah; Fred Hutchinson Cancer Research Center; Cancer Council Victoria; Cancerfonden; Utah State University","keywords":"Pedigree chart; Linkage (software); Genetic linkage; Genetics; Prostate cancer; Biology; Computational biology; Genetic heterogeneity; Genome; Genome Scan; False discovery rate; Cancer; Gene; Microsatellite; Phenotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004640138,0.0003703028,0.0006888724,0.0001833921,0.0002874241,0.0001290388,0.000315211,0.00009381574,0.000149462],"category_scores_gemma":[0.0001216394,0.0002130417,0.0002786313,0.0005509745,0.000496715,0.0001182052,0.0001853745,0.0003339233,0.000001191425],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001458657,"about_ca_system_score_gemma":0.0004313183,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006112283,"about_ca_topic_score_gemma":0.007132025,"domain_scores_codex":[0.9977658,0.00004589845,0.0006847194,0.0005849352,0.000445091,0.0004734918],"domain_scores_gemma":[0.9975142,0.0005295916,0.0005690194,0.0006141947,0.0006110899,0.000161905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007568574,0.0002312481,0.8475516,0.0001006611,0.006199182,0.000007096593,0.004999027,0.00255485,0.1317573,0.00003104663,0.0001123002,0.005698754],"study_design_scores_gemma":[0.004402605,0.0002642093,0.8898252,0.0002169589,0.0115275,0.000006781119,0.0007712614,0.02109605,0.06152896,0.0003496944,0.009576067,0.0004347229],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9749214,0.007006752,0.0001851718,0.008452314,0.0004389196,0.002260953,0.006671986,0.00003476553,0.00002773381],"genre_scores_gemma":[0.981147,0.01410153,0.001676641,0.001054607,0.0002738723,0.0008108726,0.0004986456,0.00006169254,0.0003751445],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07022835,"threshold_uncertainty_score":0.9239984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06197584819550231,"score_gpt":0.3662090490047695,"score_spread":0.3042332008092672,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}