{"id":"W2009726695","doi":"10.1101/pdb.prot080218","title":"Visualizing Apoptosis in Embryos and the Germline of <i>Caenorhabditis elegans</i>","year":2014,"lang":"en","type":"article","venue":"Cold Spring Harbor Protocols","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Caenorhabditis elegans; Germline; Apoptosis; Programmed cell death; Cell biology; Biology; Embryo; Model organism; Somatic cell; Cell division; Cell; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006896303,0.0001621686,0.0002578351,0.00004521951,0.00006969477,0.00004079604,0.000259365,0.0001141156,0.000005308915],"category_scores_gemma":[0.0001658535,0.0001366094,0.0000674028,0.00008267078,0.0001893024,0.000004772479,0.0001643317,0.0001197271,0.000002105557],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009011485,"about_ca_system_score_gemma":0.00003579034,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008361612,"about_ca_topic_score_gemma":0.00003244908,"domain_scores_codex":[0.9988337,0.0001377209,0.0003282067,0.0003113911,0.0001417496,0.0002472899],"domain_scores_gemma":[0.9992481,0.00003747381,0.0001392451,0.0004507038,0.00006542922,0.0000590269],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001095538,0.00007428585,0.006780182,0.0001891141,0.00002482072,4.764644e-7,0.0001641704,0.00009805056,0.9861199,0.006064531,0.00007278701,0.0003021217],"study_design_scores_gemma":[0.002731042,0.0002223585,0.007760095,0.0001137298,0.00002087827,8.357447e-7,0.00001817584,0.0007110261,0.9653437,0.00008162812,0.02277094,0.0002256095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.973771,0.0002156681,0.007956877,0.0001948719,0.00005981779,0.01754217,0.00000555657,0.00001865363,0.0002354153],"genre_scores_gemma":[0.9890223,0.00004237919,0.001180563,0.0003037376,0.0001611726,0.009199814,0.000001162906,0.00003138947,0.00005747744],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02269816,"threshold_uncertainty_score":0.5570769,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008363948756676098,"score_gpt":0.2496915139530191,"score_spread":0.241327565196343,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}