{"id":"W2010099741","doi":"10.1038/472179a","title":"Innate immunity cues virulence","year":2011,"lang":"en","type":"article","venue":"Nature","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Virulence; Innate immune system; Biology; Immunity; Salmonella; Host (biology); Immune system; Microbiology; Gene; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001060645,0.00008515675,0.00006982926,0.00002116857,0.00007299749,0.000009355104,0.0002402214,0.0004855669,0.00005403386],"category_scores_gemma":[0.0001766132,0.00007038796,0.00003945535,0.00006197341,0.000081118,0.000003020792,0.000245876,0.0006286057,0.00002427181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006125918,"about_ca_system_score_gemma":0.0000274768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002541523,"about_ca_topic_score_gemma":0.0000324641,"domain_scores_codex":[0.9994572,0.00004298139,0.00006378564,0.0001637361,0.00009311552,0.0001791201],"domain_scores_gemma":[0.9995669,0.000003858896,0.00002349501,0.0002824833,0.00008263229,0.00004065046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001065164,0.00004721681,0.005784953,0.00001473973,0.00006171574,0.000006880135,0.0001580872,9.054122e-8,0.9837434,0.0001953186,0.00769441,0.00218671],"study_design_scores_gemma":[0.0002165303,0.0001621141,0.1182507,0.000009960981,0.000005379823,0.000005669207,0.00006653224,0.000001400282,0.8029703,0.0002613389,0.07790402,0.000145982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.98615,0.00249628,0.00002119435,0.0001163732,0.000142168,0.00007443835,0.00001680838,0.00001556002,0.01096716],"genre_scores_gemma":[0.9976072,0.0005818899,0.0005859421,0.0003775283,0.0001077494,0.000009298887,0.00002745842,0.000009414454,0.0006934732],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.180773,"threshold_uncertainty_score":0.3745136,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01628734498848996,"score_gpt":0.2855614388086766,"score_spread":0.2692740938201866,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}