{"id":"W2010385896","doi":"10.1007/s12010-013-0483-9","title":"An Ancestral Member of the Polysaccharide Lyase Family 2 Displays Endolytic Activity and Magnesium Dependence","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Biotechnology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Victoria; Agriculture and Agri-Food Canada","funders":"","keywords":"Biochemistry; Histidine; Subfamily; Pectate lyase; Chemistry; Cofactor; Enzyme; Bacteria; Biology; Gene; Genetics; Pectinase","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008185302,0.0001673947,0.0001791075,0.000007705182,0.000140406,0.00003627855,0.0003247882,0.0003523781,0.00007536424],"category_scores_gemma":[0.00001105105,0.00006359722,0.00003400745,0.0001644235,0.0003621472,0.00007182608,0.0001514227,0.0002121345,0.000003754012],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006248307,"about_ca_system_score_gemma":0.000009047502,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008587561,"about_ca_topic_score_gemma":0.00007321288,"domain_scores_codex":[0.9990995,0.00001438163,0.0001484155,0.0003668552,0.0001000017,0.0002708249],"domain_scores_gemma":[0.99958,0.00006977649,0.0001108041,0.0001374457,0.00001507912,0.00008687516],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001793445,0.0000417903,0.002039935,0.0000200271,0.000005371932,0.000001118688,0.000007180569,1.368235e-7,0.9682941,0.0002410049,0.00002176762,0.02930964],"study_design_scores_gemma":[0.0000917521,0.00006005958,0.04989401,0.000006921436,0.00001494374,0.00003792279,0.0001590326,0.00005527426,0.9489201,0.0005250793,0.00008762046,0.0001472892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984076,0.0001924593,0.000001834348,0.0008524637,0.00003172513,0.0001814649,0.0000736906,0.00004432736,0.0002144049],"genre_scores_gemma":[0.9995515,0.0001002941,0.00005608145,0.0001626571,0.00004744909,0.00001808348,0.00000702792,0.000001018217,0.00005584223],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04785407,"threshold_uncertainty_score":0.2717863,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009184802601405917,"score_gpt":0.1927277347996999,"score_spread":0.183542932198294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}