{"id":"W2010559454","doi":"10.1128/jb.00032-13","title":"PilMNOPQ from the Pseudomonas aeruginosa Type IV Pilus System Form a Transenvelope Protein Interaction Network That Interacts with PilA","year":2013,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Periplasmic space; Pilus; Biology; Pilin; Bacterial outer membrane; Inner membrane; Cytoplasm; Cell biology; Fimbriae Proteins; Cell envelope; Pseudomonas aeruginosa; Operon; Microbiology; Biochemistry; Escherichia coli; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008694555,0.0006093364,0.0002296175,0.0003664994,0.0004472453,0.0004506765,0.0002821371,0.0003279496,0.001881885],"category_scores_gemma":[0.0001304313,0.0001630839,0.0003467179,0.0002492608,0.0001866483,0.0004290179,0.0006161994,0.0004049914,0.001111348],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005790697,"about_ca_system_score_gemma":0.0003148666,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008038859,"about_ca_topic_score_gemma":0.001522725,"domain_scores_codex":[0.9998709,0.0000195058,0.00000608804,0.00002589186,0.00005177544,0.0000258216],"domain_scores_gemma":[0.999945,0.000004751369,0.00001614449,0.000004174594,0.000008589352,0.00002137986],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001185463,0.00004835424,0.007449376,0.0001698868,0.00003437935,0.001055777,0.00005614842,0.0005128797,0.9733979,0.001922457,0.0008691326,0.01436506],"study_design_scores_gemma":[0.00007704266,0.0004917992,0.1377401,0.00007689087,0.0001558687,0.008347555,0.0003575589,0.03064593,0.7318077,0.004730622,0.08552494,0.0000439471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9444973,0.007230242,0.03412474,0.0008947835,0.00008756071,0.0001263962,0.0009707337,0.0004648167,0.01160339],"genre_scores_gemma":[0.9801735,0.001873215,0.008665401,0.0001738071,0.00003314921,0.00006125589,0.002126119,0.0000305836,0.006862906],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001881885,"threshold_uncertainty_score":0.006295562,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009562872377700874,"score_gpt":0.2043883310822992,"score_spread":0.1948254587045983,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}