{"id":"W2010559454","doi":"10.1128/jb.00032-13","title":"PilMNOPQ from the Pseudomonas aeruginosa Type IV Pilus System Form a Transenvelope Protein Interaction Network That Interacts with PilA","year":2013,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Periplasmic space; Pilus; Biology; Pilin; Bacterial outer membrane; Inner membrane; Cytoplasm; Cell biology; Fimbriae Proteins; Cell envelope; Pseudomonas aeruginosa; Operon; Microbiology; Biochemistry; Escherichia coli; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001166373,0.0001888004,0.0002740883,0.00002286449,0.00007540035,0.00005882434,0.000254232,0.0001858393,0.00008300324],"category_scores_gemma":[0.00003645978,0.0001039795,0.00009140044,0.00007743957,0.00008049026,0.00003392471,0.0000504536,0.0002847347,0.0000133236],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003537054,"about_ca_system_score_gemma":0.00005736947,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000470469,"about_ca_topic_score_gemma":0.00001726964,"domain_scores_codex":[0.998961,0.0001343505,0.0003821749,0.0001893558,0.0001066141,0.0002265457],"domain_scores_gemma":[0.998979,0.00003739016,0.0004638902,0.0001898835,0.0002428494,0.00008694493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009635857,0.0000165054,0.002259673,0.00001622861,0.0001183824,0.000007937914,0.00009477599,0.00001156507,0.9936631,0.00001578706,0.0007467775,0.002085715],"study_design_scores_gemma":[0.002923556,0.004536152,0.2682801,0.0008238737,0.0001938131,0.003085998,0.000797809,0.0003249415,0.6824871,0.000403341,0.03531287,0.0008305465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971032,0.0001594086,0.0008796015,0.000861403,0.0006016635,0.0002653814,0.000007527668,0.000007855884,0.0001139459],"genre_scores_gemma":[0.9975352,0.00005234569,0.0007943107,0.0003752296,0.001043817,0.00001311382,0.00009943679,0.00001804741,0.0000684987],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.311176,"threshold_uncertainty_score":0.424016,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009562872377700874,"score_gpt":0.2043883310822992,"score_spread":0.1948254587045983,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}