{"id":"W2011001330","doi":"10.1371/journal.pgen.0030192","title":"Identification of Two Independent Risk Factors for Lupus within the MHC in United Kingdom Families","year":2007,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Anthony Nolan; National Institute of Allergy and Infectious Diseases; Broad Institute; Wellcome Trust; National Institute of Diabetes and Digestive and Kidney Diseases; Versus Arthritis; National Center for Research Resources; Cancer Research Institute","keywords":"Biology; Genetics; Linkage disequilibrium; Allele; Major histocompatibility complex; Single-nucleotide polymorphism; Locus (genetics); Human leukocyte antigen; MHC class I; Haplotype; Genetic association; SNP; Genotype; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006514995,0.000360616,0.0005013847,0.001339727,0.0008348699,0.0007474846,0.0004528314,0.0006344906,0.003322759],"category_scores_gemma":[0.003789589,0.0003538651,0.00036205,0.001448817,0.0005585936,0.0002669463,0.001262699,0.0003679749,0.0003336428],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005807512,"about_ca_system_score_gemma":0.0003670496,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03530593,"about_ca_topic_score_gemma":0.03851312,"domain_scores_codex":[0.9987851,0.0004819522,0.0001326679,0.0003080734,0.000137539,0.0001546945],"domain_scores_gemma":[0.9977171,0.0006104459,0.0008893721,0.0002335767,0.0002363375,0.0003131721],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003415729,0.00002131311,0.9886093,0.00002786854,0.00006104012,0.001645627,0.001471866,0.00007496122,0.00270043,0.000112756,0.0002251346,0.004708209],"study_design_scores_gemma":[0.00001839464,0.00007398694,0.996653,0.00002567229,0.00003003147,0.002059541,0.0004900019,0.0001534244,0.0001428113,0.00004606092,0.0002997863,0.000007295114],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999092,0.0002521966,0.0001564363,0.00003915553,0.00000328178,0.000004294449,0.0001066052,0.000003396152,0.0003425429],"genre_scores_gemma":[0.9993408,0.000108981,0.0002174413,0.00003221587,0.000002751492,0.000007542897,0.00009763082,0.00000323765,0.0001892812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03530593,"threshold_uncertainty_score":0.0702008,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0290712326228201,"score_gpt":0.26054017823435,"score_spread":0.2314689456115299,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}