{"id":"W2011661317","doi":"10.1021/bi800099d","title":"Functional and Structural Characterization of DR_0079 from <i>Deinococcus radiodurans</i>, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5′-Di- and Triphosphates","year":2008,"lang":"en","type":"article","venue":"Biochemistry","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"Cytosine; Ribonucleoside; Deinococcus radiodurans; Chemistry; Characterization (materials science); Nucleic acid; DNA; Biochemistry; Physics; RNA; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004592436,0.0002074264,0.0002022372,0.00002018138,0.000104215,0.00001837503,0.0001046285,0.000196125,0.00001031401],"category_scores_gemma":[0.00005619621,0.0001761128,0.0000525321,0.00007051164,0.0003233917,0.000008212369,0.00007700468,0.00008992953,2.522661e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009258535,"about_ca_system_score_gemma":0.00009123425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002886667,"about_ca_topic_score_gemma":0.000002174085,"domain_scores_codex":[0.9989197,0.0000105302,0.0001997577,0.0004926249,0.0001564648,0.0002209265],"domain_scores_gemma":[0.9993724,0.0000194654,0.00009840787,0.0002299318,0.0001380042,0.0001417786],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009609215,0.00005218624,0.004080211,0.00009927667,0.00007928411,0.000002176176,0.00002242064,0.000001108645,0.9942246,0.000004650189,0.0001042809,0.0003688901],"study_design_scores_gemma":[0.00202559,0.0002054402,0.02174415,0.00003777612,0.00003314847,0.00007652523,0.0000105518,0.0002365601,0.9748722,0.00001216573,0.0005278633,0.0002180371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995014,0.0011891,0.00286521,0.0001636574,0.00002012462,0.0002731978,0.0004443057,0.00001153928,0.00001884113],"genre_scores_gemma":[0.9966009,0.0002748839,0.000996081,0.00009526146,0.0001359267,0.00005309524,0.001613481,0.0000234529,0.0002069141],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0193524,"threshold_uncertainty_score":0.7181672,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01674275449677649,"score_gpt":0.2110742912618921,"score_spread":0.1943315367651157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}