{"id":"W2011810928","doi":"10.1128/jcm.00505-14","title":"Emergence of New CMRSA7/USA400 Methicillin-Resistant Staphylococcus aureus <i>spa</i> Types in Alberta, Canada, from 2005 to 2012","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Public Health Agency of Canada; Health Canada; Ministry of Health; University of Alberta; Provincial Laboratory of Public Health","funders":"Alberta Health Services","keywords":"Staphylococcus aureus; Multilocus sequence typing; Epidemiology; Methicillin-resistant Staphylococcus aureus; Mupirocin; clone (Java method); Staphylococcal Skin Infections; Staphylococcal infections; Pulsed-field gel electrophoresis; Antibiotic resistance; Molecular epidemiology; Public health; Medicine; Microbiology; Drug resistance; Typing; Biology; Antibiotics; Internal medicine; Genotype; Bacteria; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005633386,0.0004844089,0.0002618616,0.002013318,0.001575268,0.001409132,0.0009868146,0.0005275623,0.0007050994],"category_scores_gemma":[0.000987959,0.0003540402,0.000451602,0.002417578,0.0007161801,0.0002465213,0.0005907391,0.0006027386,0.0001184157],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.02106712,"about_ca_system_score_gemma":0.02901305,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9852884,"about_ca_topic_score_gemma":0.9917579,"domain_scores_codex":[0.9992332,0.00002996147,0.00002297804,0.00009045313,0.0004211545,0.0002021864],"domain_scores_gemma":[0.9985107,0.0000442369,0.0001938441,0.00002656981,0.0008322996,0.0003923155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003003526,0.0000791651,0.9631873,0.00008041975,0.00005642921,0.001702033,0.00157591,0.0005340084,0.005748971,0.0002087697,0.002024316,0.02450241],"study_design_scores_gemma":[0.000009888689,0.00004754481,0.9949369,0.00003486174,0.00001706554,0.0004598019,0.001369082,0.0004594043,0.0003519784,0.00002392704,0.002273634,0.00001582852],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994951,0.0009987897,0.0002265516,0.0003008069,0.00002359511,0.00004673587,0.001073816,0.0000255922,0.002353003],"genre_scores_gemma":[0.9943618,0.00113623,0.0007740434,0.0003904189,0.00001781147,0.00001464978,0.001520541,0.0000106198,0.001773943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02106712,"threshold_uncertainty_score":0.1528534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03158861998742166,"score_gpt":0.3396689191241337,"score_spread":0.308080299136712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}