{"id":"W2011832001","doi":"10.1371/journal.pgen.0020002","title":"Retroviral Elements and Their Hosts: Insertional Mutagenesis in the Mouse Germ Line","year":2006,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":363,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research","keywords":"Biology; Endogenous retrovirus; Insertional mutagenesis; Transposable element; Genetics; Mutagenesis; Germline; Gene; Genome; Mutation; Retrotransposon; Laboratory mouse","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008398195,0.00009166496,0.00007610939,0.000008320199,0.0001202014,0.0000457444,0.0001475477,0.00004780224,0.00009877281],"category_scores_gemma":[0.00001196396,0.00003021072,0.00002897214,0.0001697588,0.0000336343,0.00002091895,0.00004629805,0.00005623012,0.000008552192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000107109,"about_ca_system_score_gemma":0.000005058552,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006254992,"about_ca_topic_score_gemma":0.001581373,"domain_scores_codex":[0.9993245,0.00005110233,0.0001752465,0.0001568719,0.0001351065,0.0001571886],"domain_scores_gemma":[0.9997852,0.00007268039,0.00004126188,0.00004875498,0.00002701514,0.00002504275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000009391072,0.0003439931,0.1778419,0.000003978494,0.00001040243,0.000002320117,0.00018666,0.00004454544,0.8136044,0.000290741,0.0001697321,0.007491874],"study_design_scores_gemma":[0.0002789566,0.0003097793,0.9193041,0.000006871277,0.00001584545,0.000007344682,0.0003035125,0.002504301,0.06614666,0.00341665,0.007491741,0.000214232],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976996,0.0003607917,0.000001197556,0.001412513,0.00001863049,0.0001469974,0.00008645733,0.00001434514,0.0002595118],"genre_scores_gemma":[0.9989516,0.00007337298,0.0001168809,0.0003298142,0.0002689717,0.00001813745,0.0001049539,8.155594e-7,0.0001354179],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7474578,"threshold_uncertainty_score":0.1231957,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0193212547260216,"score_gpt":0.2006136758518183,"score_spread":0.1812924211257967,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}