{"id":"W2011949339","doi":"10.1089/aid.2004.20.1015","title":"Construction of an Infectious HIV Type 1 Molecular Clone from an African Patient with a Subtype D/C Recombinant Virus","year":2004,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Virology; Biology; Recombinant DNA; clone (Java method); Virus; Recombinant virus; Lentivirus; Plasmid; Viral disease; DNA; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002636004,0.0001719789,0.0002912828,0.0003377343,0.0004120938,0.00005096195,0.0001654506,0.0001419563,0.0003100784],"category_scores_gemma":[0.0000729938,0.0001311814,0.00003247644,0.0003326925,0.001055344,0.000200979,0.00009230426,0.0004326375,0.0001357417],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001111665,"about_ca_system_score_gemma":0.000222357,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01159624,"about_ca_topic_score_gemma":0.00192798,"domain_scores_codex":[0.9981782,0.0004148436,0.0002258526,0.0004331323,0.0001828334,0.0005651187],"domain_scores_gemma":[0.9989148,0.0000794665,0.00007577872,0.0004332253,0.0003411016,0.0001555978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004070809,0.003349221,0.1654721,0.00004427124,0.0008249231,0.000438432,0.00202346,0.000009937342,0.7848953,0.01631873,0.0001752681,0.02237755],"study_design_scores_gemma":[0.009000996,0.1020022,0.1282321,0.0001400593,0.0000842389,0.0002302888,0.002670302,3.798168e-7,0.735056,0.01843816,0.003615902,0.0005293054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997978,0.0007266075,0.00002277136,0.00003581727,0.00005894282,0.0003484369,0.0001380326,0.00004707235,0.0006443105],"genre_scores_gemma":[0.9988945,0.0001465273,0.0004003072,0.00001696986,0.00001644093,0.00003263062,0.0003864781,0.00002331572,0.00008283302],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09865295,"threshold_uncertainty_score":0.9949856,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02558377269329672,"score_gpt":0.3100336300791958,"score_spread":0.2844498573858991,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}