{"id":"W2012159765","doi":"10.1038/ismej.2009.95","title":"Phase variation has a role in <i>Burkholderia ambifaria</i> niche adaptation","year":2009,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; Université de Montréal; Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research; College of Engineering, Michigan State University; Université de Lyon; Fonds Québécois de la Recherche sur la Nature et les Technologies; Armand-Frappier Foundation; Medical School, University of Michigan; Michigan State University","keywords":"Biology; Niche; Adaptation (eye); Variation (astronomy); Phase variation; Ecology; Evolutionary biology; Burkholderia; Ecological niche; Genetics; Bacteria; Phenotype; Habitat; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001542526,0.0002806216,0.0002447837,0.0002833107,0.0001792917,0.0005662194,0.0002186246,0.0003822906,0.001532815],"category_scores_gemma":[0.0004450122,0.0001837422,0.0002774743,0.0002186378,0.0002294756,0.0002668654,0.0004288389,0.000445577,0.0005442949],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002216246,"about_ca_system_score_gemma":0.0001398357,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006949588,"about_ca_topic_score_gemma":0.0006086363,"domain_scores_codex":[0.999809,0.00002838519,0.00001567329,0.00004092148,0.00004645381,0.00005954903],"domain_scores_gemma":[0.9996202,0.00005211498,0.0001880934,0.00004033602,0.00004850101,0.00005076554],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001282057,0.00004369129,0.005903766,0.00003366973,0.000009880641,0.0001833091,0.00005829965,0.00007281323,0.9893585,0.0002141206,0.0001150994,0.003878603],"study_design_scores_gemma":[0.00007341352,0.0009775587,0.3630842,0.00005585262,0.00008667576,0.004961624,0.0006519382,0.003580584,0.6084217,0.001048126,0.01694607,0.0001122851],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949744,0.0008099211,0.001734213,0.0001652671,0.00003059263,0.00002310061,0.0003074229,0.00009428351,0.001860883],"genre_scores_gemma":[0.997881,0.0002187464,0.0007508019,0.00009233704,0.0000171092,0.000009565364,0.0003740153,0.00002728619,0.0006290015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001532815,"threshold_uncertainty_score":0.005127788,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03659562327292819,"score_gpt":0.3343271385809143,"score_spread":0.2977315153079861,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}