{"id":"W2012398571","doi":"10.1186/1753-6561-5-s7-i21","title":"Populus resequencing: towards genome-wide association studies","year":2011,"lang":"en","type":"article","venue":"BMC Proceedings","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Medicine; Genome-wide association study; Computational biology; Bioinformatics; Genetics; Single-nucleotide polymorphism; Gene; Biology; Genotype","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004540146,0.0001081525,0.0001274035,0.00001592184,0.0001836489,0.00004579619,0.0001740862,0.00006540825,0.0001988293],"category_scores_gemma":[0.0005902673,0.00004232638,0.00005860558,0.0002733612,0.00002957911,0.0001930966,0.0001175119,0.00007270649,0.00006458924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001597885,"about_ca_system_score_gemma":0.000005441809,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002376693,"about_ca_topic_score_gemma":0.0001781081,"domain_scores_codex":[0.9990644,0.000009625018,0.0001714291,0.0002847154,0.0002196928,0.0002501277],"domain_scores_gemma":[0.999516,0.0000255902,0.0001345955,0.00002448427,0.0002404234,0.00005893632],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001936415,0.0004061464,0.6632468,0.0001962245,0.0003304624,0.000005891245,0.007345365,0.000001094619,0.1161149,0.02075246,0.1446255,0.04678149],"study_design_scores_gemma":[0.0001314414,0.0002183338,0.7138695,0.00001525886,0.00003246135,0.000001997848,0.004959485,0.000003708103,0.0125472,0.003934206,0.2640161,0.0002703492],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9707147,0.0002852441,0.000002831255,0.003639782,0.0002862535,0.0001650404,0.000001994979,0.0001985399,0.02470565],"genre_scores_gemma":[0.9866015,0.0001895294,0.000721001,0.001075708,0.0003629729,0.00003604051,0.00000569575,0.000001162228,0.01100636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1193906,"threshold_uncertainty_score":0.2177041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1147065184084119,"score_gpt":0.2546800111452267,"score_spread":0.1399734927368148,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}