{"id":"W2012508686","doi":"10.1042/bj20140931","title":"Red fluorescent genetically encoded Ca2+ indicators for use in mitochondria and endoplasmic reticulum","year":2014,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":177,"is_retracted":false,"has_abstract":true,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary; University of Alberta","funders":"National Institute of Neurological Disorders and Stroke; Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Endoplasmic reticulum; Cytoplasm; Intracellular; Mitochondrion; Green fluorescent protein; Cell biology; Calcium signaling; Fluorescence; Extracellular; Biochemistry; Biology; Biophysics; Live cell imaging; Chemistry; Cell; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002599675,0.0001826453,0.0002133191,0.000119907,0.00007611964,0.0000580768,0.0001629053,0.0003321067,0.00003214574],"category_scores_gemma":[0.0008237983,0.0001640626,0.00010907,0.00008922951,0.0001297894,0.000005029675,0.00007763083,0.0002384639,0.000003826593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001787517,"about_ca_system_score_gemma":0.00006343194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002497172,"about_ca_topic_score_gemma":0.000009255637,"domain_scores_codex":[0.9986066,0.0001338452,0.0003813871,0.0003956292,0.0001304499,0.000352056],"domain_scores_gemma":[0.9992502,0.0000615131,0.0001142081,0.0002244158,0.00007480083,0.0002748718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004045961,0.00005682551,0.005168577,0.00001234718,0.00001851506,0.000004647053,0.00001788278,0.000004220395,0.9826294,0.00008760092,0.01059818,0.0009971948],"study_design_scores_gemma":[0.002580858,0.000512922,0.002442135,0.00002776004,0.00002441324,0.0003647805,0.00001743358,0.0002945978,0.9241424,0.0002578818,0.06906232,0.0002724687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985612,0.0002388499,0.01283731,0.0003247111,0.0006106487,0.0002456151,0.00001450948,0.000008506226,0.0001078923],"genre_scores_gemma":[0.9625716,0.0003265591,0.0348263,0.0007255892,0.001155931,0.00003559578,0.00007437995,0.00003523918,0.0002487834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05848699,"threshold_uncertainty_score":0.6690277,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01003163824986666,"score_gpt":0.2334249341197826,"score_spread":0.223393295869916,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}