{"id":"W2012732176","doi":"10.1073/pnas.1301804110","title":"Single-molecule DNA repair in live bacteria","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":206,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"DNA ligase; Base excision repair; DNA repair; DNA; DNA damage; Biology; DNA polymerase; Cell biology; Polymerase; DNA Ligases; Biochemistry; Molecular biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004985098,0.00006973743,0.00008469571,0.00006675865,0.00004399145,0.0000107086,0.0004636591,0.00008917631,0.00002567153],"category_scores_gemma":[0.0003766198,0.00005047059,0.00006834198,0.0002419672,0.0002966875,0.00002541302,0.0001754089,0.00005995569,0.000003587597],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001384927,"about_ca_system_score_gemma":0.00002151951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008290385,"about_ca_topic_score_gemma":1.544666e-7,"domain_scores_codex":[0.9990445,0.000005985772,0.0002106007,0.0002211049,0.0003918346,0.0001259448],"domain_scores_gemma":[0.9995971,0.00001278154,0.0001876036,0.000009479631,0.0001693267,0.00002367094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000005076588,0.00003594757,0.001573438,0.00001393656,0.000005642315,2.169241e-9,0.00003837411,0.000003819716,0.9952974,0.001966585,0.0009793354,0.00008044655],"study_design_scores_gemma":[0.00009477272,0.00008952706,0.02283331,0.00002988899,0.000002344048,0.000003947945,0.00009726541,0.0001654489,0.9692559,0.007078637,0.0002889126,0.00006003632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951658,0.00005393849,4.047044e-7,0.0007635218,0.00001439712,0.0001574304,0.000004830412,0.000006619831,0.003833081],"genre_scores_gemma":[0.9965659,0.000008854529,0.002781842,0.0003097844,0.00004508974,0.00001589228,2.370845e-7,0.000003841007,0.0002685218],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02604149,"threshold_uncertainty_score":0.2058131,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02275337764898825,"score_gpt":0.2668841405143844,"score_spread":0.2441307628653961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}