{"id":"W2012890157","doi":"10.1128/jb.00393-12","title":"Genome Sequence of Shigella flexneri Serotype 5a Strain M90T Sm","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Shigella flexneri; Biology; Serotype; Shigella; Whole genome sequencing; Microbiology; Strain (injury); Genome; Genetics; Enterobacteriaceae; Virology; Bacteria; Gene; Salmonella; Escherichia coli; Anatomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002096705,0.0005125419,0.0004706001,0.001191523,0.0003681883,0.000308782,0.0003375318,0.0005494996,0.002832495],"category_scores_gemma":[0.0004157061,0.0002033103,0.0006221934,0.001603994,0.0001469973,0.0002061021,0.0002436741,0.0006064643,0.001906823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000351011,"about_ca_system_score_gemma":0.0008111371,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009767051,"about_ca_topic_score_gemma":0.01023266,"domain_scores_codex":[0.9998662,0.00002218785,0.00001514709,0.00003164996,0.00004487724,0.00001982589],"domain_scores_gemma":[0.9997506,0.00004555439,0.0000705437,0.00001741155,0.00005665189,0.00005933423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001732664,0.0002354698,0.008450951,0.0009168985,0.0000818075,0.0006495299,0.0003996883,0.000763464,0.968469,0.0004327468,0.003459786,0.01440804],"study_design_scores_gemma":[0.0004848743,0.002643681,0.7217315,0.0005544274,0.0009532967,0.003156721,0.001427445,0.005336121,0.131275,0.0009265977,0.1313565,0.000153823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7705802,0.003331486,0.004745925,0.0006636973,0.0002201298,0.0001535158,0.2146347,0.0002812905,0.005389082],"genre_scores_gemma":[0.4972767,0.00243606,0.01695494,0.0003387368,0.00007590094,0.0001186416,0.4785449,0.000180233,0.004073859],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009767051,"threshold_uncertainty_score":0.01942039,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03538235006188494,"score_gpt":0.3158357980261288,"score_spread":0.2804534479642438,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}