{"id":"W2013086585","doi":"10.1007/s00705-014-2053-z","title":"Molecular characterization of a Chinese isolate of potato virus A (PVA) and evidence of a genome recombination event between PVA variants at the 3′-proximal end of the genome","year":2014,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Ministry of Science and Technology of the People's Republic of China","keywords":"Potyviridae; Biology; Potyvirus; Genome; Virology; Virus; Nucleic acid sequence; Phylogenetic tree; Recombination; Genetics; Genomic organization; Whole genome sequencing; Plant virus; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001055574,0.0003477719,0.0002392035,0.0005222067,0.0003773396,0.0003560352,0.0003229949,0.0003663804,0.0008470515],"category_scores_gemma":[0.0004005694,0.0001780167,0.00055936,0.0004738534,0.0004426659,0.0002475015,0.0002796151,0.0006902039,0.0004217174],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003464146,"about_ca_system_score_gemma":0.0004213547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004847052,"about_ca_topic_score_gemma":0.002463608,"domain_scores_codex":[0.9999021,0.00001032494,0.000007166898,0.00003245519,0.00001997655,0.0000278501],"domain_scores_gemma":[0.999465,0.0001835904,0.0000858001,0.00008075639,0.00006404083,0.0001207123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008417582,0.00003345755,0.001870883,0.00002530206,0.00001166923,0.0002329717,0.0000732178,0.00003757359,0.996928,0.00006890518,0.00002065679,0.0006132044],"study_design_scores_gemma":[0.00008370588,0.001466035,0.2966684,0.00002225571,0.000200369,0.007294861,0.0006594035,0.001291726,0.6866745,0.0002920806,0.00530357,0.00004309558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978042,0.0001413806,0.0007398757,0.00002660342,0.00001175126,0.0000239046,0.0003666274,0.000008486868,0.0008771122],"genre_scores_gemma":[0.9950469,0.0001422686,0.001110792,0.00004053623,0.00001493737,0.00002250795,0.002508073,0.00001531894,0.001098793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004847052,"threshold_uncertainty_score":0.009637654,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01660406842564329,"score_gpt":0.2464766886012434,"score_spread":0.2298726201756001,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}