{"id":"W2013815207","doi":"10.1371/journal.pone.0022305","title":"Using Mitochondrial and Nuclear Sequence Data for Disentangling Population Structure in Complex Pest Species: A Case Study with Dermanyssus gallinae","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bird parasitology and diseases","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Muséum National d'Histoire Naturelle; University of Toronto; McGill University; Australian Egg Corporation Limited; Universiteit van Amsterdam; Bayer HealthCare; De La Salle University","keywords":"PEST analysis; Biology; Population; Ecology; Biodiversity; Ecological niche; Biological dispersal; Species complex; Genetic structure; Zoology; Evolutionary biology; Genetic variation; Genetics; Habitat; Botany; Demography","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003886593,0.00012149,0.0002291672,0.0000584403,0.000199948,0.00001130533,0.0001355171,0.0001057517,0.0001319298],"category_scores_gemma":[0.00004277388,0.000106429,0.0000107393,0.00006062543,0.0001330794,0.0001486042,0.00008299061,0.0001264112,0.000002539606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001779323,"about_ca_system_score_gemma":0.00001843323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009503526,"about_ca_topic_score_gemma":0.003211464,"domain_scores_codex":[0.9992027,0.00009447867,0.0001682547,0.0003240045,0.00002614996,0.0001844384],"domain_scores_gemma":[0.9995052,0.00005686177,0.00007792731,0.0003056705,0.00003220374,0.0000222039],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001722342,0.00160709,0.9234145,0.00006770141,0.0003661335,0.0006159031,0.002364572,0.000003451737,0.06955325,0.0002034154,0.00002370777,0.00005793313],"study_design_scores_gemma":[0.01447072,0.002025444,0.951892,0.0003006221,0.002614509,0.003550545,0.01798397,0.002944876,0.002674821,0.0003552762,0.0001216289,0.001065601],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986535,0.0002070177,0.00003539418,0.00001162929,0.00005738138,0.0006611376,0.0003203423,0.00003037337,0.00002318014],"genre_scores_gemma":[0.9947951,0.000004381769,0.004726827,0.00003020098,0.00004466541,0.000007202663,0.000365933,0.00001467685,0.00001094515],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06687842,"threshold_uncertainty_score":0.434005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2812351016282796,"score_gpt":0.3229970893601821,"score_spread":0.04176198773190248,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}