{"id":"W2014098988","doi":"10.1016/j.virol.2014.01.020","title":"HIV-1 mutates to evade IFITM1 restriction","year":2014,"lang":"en","type":"article","venue":"Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Virology; Viral replication; Virus; Genome; Gene; Transmembrane protein; Mutation; Genetics; Stop codon; Viral entry; Tetherin; Receptor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001550745,0.0001016456,0.0001638726,0.0001417347,0.000127577,0.000006220206,0.0001296351,0.0001639974,0.0008831221],"category_scores_gemma":[0.0001446164,0.00008315385,0.0000403003,0.0001066341,0.000096301,0.00002660663,0.00006114412,0.000162455,0.03776852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002892863,"about_ca_system_score_gemma":0.00001988137,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000949474,"about_ca_topic_score_gemma":0.00003073931,"domain_scores_codex":[0.998941,0.0002559961,0.0001273003,0.0002513579,0.00002183289,0.0004025031],"domain_scores_gemma":[0.9995065,0.0001639579,0.00002536144,0.0002318314,0.00002541926,0.00004697729],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005363016,0.0002877056,0.01529978,0.000008015999,0.0002165989,0.00003807614,0.0003191025,0.00005636562,0.8557709,0.004602361,0.09003233,0.0328324],"study_design_scores_gemma":[0.001644488,0.001540746,0.1434034,0.000003970045,0.00002543655,0.0001024697,0.00003602475,0.000009542347,0.03172781,0.0008918774,0.8204647,0.0001495635],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871573,0.0003343243,0.001149917,0.003608097,0.0004010409,0.0002009789,0.00004094051,0.00009390938,0.00701351],"genre_scores_gemma":[0.9949478,0.00003405635,0.0001141382,0.0005270469,0.0000493166,0.00006197587,0.0001915902,0.000009868338,0.00406421],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8240432,"threshold_uncertainty_score":0.9669567,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01028573679740731,"score_gpt":0.2527171789367301,"score_spread":0.2424314421393228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}