{"id":"W2014868774","doi":"10.1128/genomea.00122-12","title":"The Genome of Cronobacter sakazakii Bacteriophage vB_CsaP_GAP227 Suggests a New Genus within the<i>Autographivirinae</i>","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Agriculture and Agri-Food Canada; Public Health Agency of Canada; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lytic cycle; Cronobacter sakazakii; Biology; Bacteriophage; Genome; Whole genome sequencing; Microbiology; Genetics; Bacteria; Gene; Virus; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004124337,0.000340865,0.000255847,0.00006359303,0.0003806052,0.0002844335,0.001124201,0.0001374102,0.0002604545],"category_scores_gemma":[0.00003124469,0.0002192517,0.0002097596,0.0002360119,0.0003416176,0.00003172789,0.0005580293,0.0002142704,0.0002634973],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003551085,"about_ca_system_score_gemma":0.0001880004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003574263,"about_ca_topic_score_gemma":0.000187911,"domain_scores_codex":[0.9976247,0.0001588454,0.0005788436,0.000522701,0.0003890327,0.0007259062],"domain_scores_gemma":[0.998087,0.0000221455,0.0002861648,0.00118137,0.0002140668,0.0002092279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001358203,0.00009512671,0.01421138,0.00002474035,0.0002941709,0.000002916406,0.0002924953,0.000009785168,0.9809194,0.00003627623,0.001864495,0.002113439],"study_design_scores_gemma":[0.001583756,0.001014186,0.3850136,0.00002834422,0.00005828084,0.00003354274,0.0004375536,0.000006911443,0.02450626,0.0001887048,0.5865517,0.0005771617],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954612,0.001426889,0.0001605238,0.0004975739,0.0002842466,0.0008618649,0.00009586543,0.00001631363,0.001195561],"genre_scores_gemma":[0.9899482,0.0008124181,0.0001728858,0.0005783091,0.0003882405,0.0001575797,0.0004125039,0.00005211867,0.007477789],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9564131,"threshold_uncertainty_score":0.8940826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009789857862333716,"score_gpt":0.2388697163810681,"score_spread":0.2290798585187344,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}