{"id":"W2015305408","doi":"10.1016/j.tig.2005.01.004","title":"Transfer RNA gene recruitment in mitochondrial DNA","year":2005,"lang":"en","type":"article","venue":"Trends in Genetics","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Mitochondrial DNA; Genetics; Gene; RNA; DNA; Transfer RNA; Gene transfer; MT-RNR1; Computational biology; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006926432,0.000128476,0.0001134346,0.0001180894,0.00002137236,0.00001216311,0.0001670238,0.0001359647,0.0001449557],"category_scores_gemma":[0.000003840151,0.0001324542,0.000058409,0.0001830641,0.00003614849,0.000002615756,0.00002621746,0.00008087324,0.00001125156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004699014,"about_ca_system_score_gemma":0.0000379573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001269497,"about_ca_topic_score_gemma":0.0005073043,"domain_scores_codex":[0.9990567,0.00003896977,0.0002579131,0.0003085725,0.0001009092,0.0002369203],"domain_scores_gemma":[0.9995573,0.000003035963,0.00001891507,0.0003500388,0.00001918669,0.0000514826],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005495538,0.000136128,0.0006884259,0.000002183113,0.00001082551,0.000002054468,0.0001218096,0.003124438,0.7832049,0.00004576095,0.001157105,0.2114514],"study_design_scores_gemma":[0.001470514,0.0001412093,0.01038776,0.000006826098,0.000009517232,0.000003787175,0.00003003036,0.0003255281,0.7376832,0.00002871396,0.2496842,0.0002286986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993368,0.002344355,0.0005975108,0.0005185234,0.0001859493,0.0001441482,0.00001737734,0.000006067787,0.002818067],"genre_scores_gemma":[0.9918095,0.001249369,0.003675238,0.0002336448,0.000475396,0.000128079,0.0001028436,0.00002121704,0.00230467],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2485271,"threshold_uncertainty_score":0.5401325,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04628945911849195,"score_gpt":0.3163557578612234,"score_spread":0.2700662987427315,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}