{"id":"W2015362120","doi":"10.4161/epi.5.1.10631","title":"Variable DNA methylation of transposable elements: The case study of mouse Early Transposons","year":2010,"lang":"en","type":"article","venue":"Epigenetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"Natural Environment Research Council; Canadian Institutes of Health Research; Sight Research UK","keywords":"Biology; Epigenetics; DNA methylation; Transposable element; Genetics; Methylation; CpG site; Phenotype; Gene silencing; Genome; DNA; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003437554,0.0003432841,0.0002559037,0.0009330559,0.0002601619,0.000267314,0.0002817763,0.0006661431,0.0003514348],"category_scores_gemma":[0.000538552,0.0001664438,0.000281481,0.0003619072,0.0005668671,0.0002003198,0.0003947551,0.0003702733,0.000115061],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001862032,"about_ca_system_score_gemma":0.00007728954,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007926169,"about_ca_topic_score_gemma":0.00121605,"domain_scores_codex":[0.9997347,0.00006272698,0.00001729294,0.00008332408,0.00005710925,0.00004481886],"domain_scores_gemma":[0.9997007,0.00008925538,0.000075412,0.00006024112,0.00002389567,0.00005050918],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006454742,0.0001538781,0.1054428,0.0001559007,0.0001045759,0.04002843,0.001469039,0.0006057017,0.8213865,0.00158989,0.0001564111,0.02826137],"study_design_scores_gemma":[0.00003085933,0.001812426,0.241331,0.0000552669,0.0002847761,0.3108315,0.0007574408,0.003029896,0.4273483,0.002124291,0.01232404,0.00007025617],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934228,0.001095615,0.004345398,0.00004181171,0.000003902656,0.00002083094,0.0000533766,0.00003477603,0.0009815128],"genre_scores_gemma":[0.994456,0.0008719002,0.00359383,0.00002981641,0.000009690916,0.00001041376,0.00006969898,0.00001483606,0.0009438954],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009330559,"threshold_uncertainty_score":0.001817942,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01839601401504347,"score_gpt":0.2327747732634711,"score_spread":0.2143787592484276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}