{"id":"W2015916158","doi":"10.1073/pnas.151009798","title":"Stationary-phase mutation in the bacterial chromosome: Recombination protein and DNA polymerase IV dependence","year":2001,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Yale University","keywords":"Biology; Genetics; Mutation; Molecular biology; Somatic hypermutation; Plasmid; Mitotic crossover; Polymerase; DNA; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001023135,0.00006419822,0.0000614252,0.00007368968,0.0001013596,0.00002271988,0.0003388671,0.00006562784,0.000008197945],"category_scores_gemma":[0.0003833412,0.00004280707,0.00002422826,0.0003152587,0.0002381461,0.00005190547,0.00006014638,0.0000623506,2.901736e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001157086,"about_ca_system_score_gemma":0.00003335521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005481464,"about_ca_topic_score_gemma":4.775123e-7,"domain_scores_codex":[0.9989921,0.00001754181,0.000201225,0.0001939774,0.0005039009,0.00009125465],"domain_scores_gemma":[0.9996091,0.00002379183,0.0002227693,0.000009005305,0.0001199537,0.00001534875],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004122284,0.00006329288,0.000318831,0.00001232493,0.000003269207,2.334652e-8,0.0001180427,0.000005972439,0.9922305,0.00611197,0.00003885212,0.001055744],"study_design_scores_gemma":[0.0004982487,0.0001872964,0.008176574,0.00002989994,0.00000397514,0.00003137119,0.000232521,0.0005097071,0.9705113,0.01965559,0.0001034376,0.00006012797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974659,0.00005920306,0.00000536412,0.001696601,0.00001296414,0.0002872165,0.000009318788,0.00000273098,0.0004607015],"genre_scores_gemma":[0.999052,0.00002207189,0.0006500783,0.0001275259,0.00004775648,0.00003133556,0.000002205846,0.000002686921,0.0000643808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02171921,"threshold_uncertainty_score":0.1745622,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02096661548050119,"score_gpt":0.2985447580005069,"score_spread":0.2775781425200057,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}