{"id":"W2015930173","doi":"10.1371/journal.ppat.1003411","title":"Viral Retasking of hBre1/RNF20 to Recruit hPaf1 for Transcriptional Activation","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transcription (linguistics); Cell biology; Viral replication; Ubiquitin ligase; Chromatin; Transcription factor; Promoter; Gene; Gene expression; Ubiquitin; Genetics; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001607815,0.0001145701,0.0001284335,0.00006760722,0.00006194974,0.00001550248,0.0001715428,0.0001047116,0.0001050885],"category_scores_gemma":[0.00009501781,0.0001142073,0.0001100455,0.00008775786,0.00003244449,0.000006666391,0.00003061928,0.0000586332,0.00002765573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002019478,"about_ca_system_score_gemma":0.00007233733,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007555327,"about_ca_topic_score_gemma":0.00001783686,"domain_scores_codex":[0.9990259,0.00005643554,0.0001962778,0.0002740164,0.0001963588,0.0002510533],"domain_scores_gemma":[0.9993405,0.00001896118,0.0000515658,0.000268958,0.0002303202,0.00008971298],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005516292,0.00008415573,0.0002807565,0.00002302859,0.0000604142,1.86104e-7,0.00009286391,0.00006019065,0.9926903,0.00004215595,0.0009643912,0.005149882],"study_design_scores_gemma":[0.0004242016,0.001583329,0.001367179,0.00001455097,0.00001223042,8.978316e-7,0.00003600789,0.0002066081,0.9928641,0.0001820782,0.003174808,0.0001340265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947907,0.00009699028,0.003428641,0.0004702712,0.00004150516,0.0008126554,0.0001238567,0.00001078395,0.0002246211],"genre_scores_gemma":[0.995743,0.00002180055,0.002717257,0.0003852086,0.0002113597,0.0003177186,0.0002110087,0.00003125853,0.0003613722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005015855,"threshold_uncertainty_score":0.465724,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04377155010853739,"score_gpt":0.2969276904785453,"score_spread":0.2531561403700079,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}