{"id":"W2015978621","doi":"10.1089/aid.2007.0282","title":"Near Full-Length Genomic Analysis of a Novel Subtype A1/C Recombinant HIV Type 1 Isolate from Canada","year":2008,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University; Jewish General Hospital","funders":"","keywords":"Recombinant DNA; Breakpoint; Virology; Biology; Genome; Genetics; Reverse transcriptase; Lentivirus; Human immunodeficiency virus (HIV); Recombinant virus; Gene; Viral disease; Polymerase chain reaction","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100258,0.0003220384,0.0002393548,0.0006823061,0.001337207,0.0007270468,0.0003259982,0.0004170324,0.001523715],"category_scores_gemma":[0.0004664126,0.000146985,0.0003630343,0.001206523,0.0003917444,0.0001075215,0.0002324236,0.0007377692,0.0003371321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00262452,"about_ca_system_score_gemma":0.003781771,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6904941,"about_ca_topic_score_gemma":0.7258124,"domain_scores_codex":[0.999729,0.00001114843,0.00001044558,0.00005647428,0.0001109097,0.00008197392],"domain_scores_gemma":[0.9997301,0.00004374691,0.00002943588,0.00001843642,0.0001052882,0.00007304908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00110033,0.0003952032,0.09693262,0.0002821017,0.0001310627,0.009660496,0.004651268,0.0009648986,0.8462431,0.0008509595,0.00159793,0.03718998],"study_design_scores_gemma":[0.00007249264,0.0006605739,0.8465452,0.00007800807,0.0002367468,0.01516966,0.005558469,0.002017095,0.09818613,0.0002205019,0.03116211,0.00009298179],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990308,0.0005324726,0.0009074709,0.0001603698,0.00001679113,0.0000713624,0.004517005,0.00003081077,0.00345584],"genre_scores_gemma":[0.9832973,0.0007842905,0.00397148,0.0001863841,0.0000136349,0.00001595951,0.008517462,0.0000272413,0.003186345],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3095059,"threshold_uncertainty_score":0.6226572,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0697429590716262,"score_gpt":0.3152710679678388,"score_spread":0.2455281088962126,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}