{"id":"W2016196910","doi":"10.1186/1471-2164-14-574","title":"Genomic characterization of JG068, a novel virulent podovirus active against Burkholderia cenocepacia","year":2013,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Directorate for Biological Sciences; University of Alberta; Cystic Fibrosis Canada","keywords":"Biology; Burkholderia cenocepacia; Microbiology; Lytic cycle; Burkholderia; Lysin; Bacteriophage; Phage therapy; Genetics; Burkholderia cepacia complex; Gene; Escherichia coli; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005430736,0.0001699991,0.0001864626,0.00004383629,0.0001021155,0.00005104718,0.0002158469,0.00008659808,0.002756524],"category_scores_gemma":[0.00001066816,0.000173625,0.0001005772,0.0001090957,0.0001001554,0.0003228463,0.0001981092,0.0001063442,0.001549989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003044518,"about_ca_system_score_gemma":0.00002866005,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006997835,"about_ca_topic_score_gemma":0.0001975722,"domain_scores_codex":[0.9990327,0.00002348125,0.0003187729,0.0002837024,0.00008227974,0.0002590028],"domain_scores_gemma":[0.9993582,0.00001843885,0.0002335295,0.0002722415,0.00002061453,0.00009695862],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002194936,0.0001210566,0.0008827082,0.000006943007,0.00001481756,2.692659e-7,0.0005415598,0.0001362341,0.9934226,0.00001244986,0.00009545938,0.004743912],"study_design_scores_gemma":[0.0004156971,0.0000460185,0.5926997,0.00001132958,0.00002216493,0.00000854247,0.0001938093,0.0008137987,0.391277,0.00002370145,0.014219,0.0002691987],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947203,0.000005283705,0.002424103,0.00006333828,0.0002881958,0.0004413518,0.0001655922,0.00002661047,0.001865249],"genre_scores_gemma":[0.9956707,0.00005784152,0.003052969,0.0002836369,0.00007572165,0.00003026122,0.00009546002,0.00003119812,0.0007021592],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6021456,"threshold_uncertainty_score":0.9992274,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01605917190696748,"score_gpt":0.2140895696328936,"score_spread":0.1980303977259261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}