{"id":"W2016488959","doi":"10.1128/aem.00242-14","title":"Microbiota of Human Breast Tissue","year":2014,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":561,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ottawa Regional Cancer Foundation; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; University College Cork; London Health Sciences Centre","keywords":"Biology; Gammaproteobacteria; Citrobacter; Propionibacterium; Microbiology; Population; Klebsiella; Staphylococcus; Prevotella; Bacteria; Enterobacteriaceae; Staphylococcus aureus; 16S ribosomal RNA; Escherichia coli; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008948419,0.0001557557,0.0001981749,0.00002950464,0.00008524911,0.000004082,0.0001159076,0.0001890727,0.00007006161],"category_scores_gemma":[9.58284e-7,0.0001491993,0.00003335101,0.00001938034,0.0003251256,0.000001173155,0.0001559017,0.00007031886,0.00002624184],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008801431,"about_ca_system_score_gemma":0.000006748602,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001835295,"about_ca_topic_score_gemma":0.000007290505,"domain_scores_codex":[0.9991807,0.000032056,0.000199597,0.0003354285,0.00001552318,0.0002367126],"domain_scores_gemma":[0.9996236,0.000005691664,0.00008083247,0.0002261688,0.000002644986,0.00006107149],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001753455,0.00006514433,0.001476992,0.00002050021,0.00001901627,1.680496e-7,0.00002959251,0.000001592359,0.9954969,0.0003184122,0.0006843643,0.001869788],"study_design_scores_gemma":[0.0008457825,0.0003602564,0.01827518,0.000006152685,0.00001769172,0.0001875964,0.00007852539,8.761817e-7,0.9189724,0.00006161683,0.06095401,0.0002398956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982764,0.000214814,0.0001013733,0.00005479495,0.00004365931,0.0001366719,0.000136446,0.000005891638,0.001029923],"genre_scores_gemma":[0.9980993,0.00009608452,0.0002462867,0.0003490904,0.00008489836,0.000005341707,0.0008406736,0.00001852884,0.000259834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07652447,"threshold_uncertainty_score":0.6084171,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002481868169393923,"score_gpt":0.191679813001963,"score_spread":0.1891979448325691,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}