{"id":"W2018098695","doi":"10.1021/pr060157b","title":"Transgenomic Metabolic Interactions in a Mouse Disease Model:  Interactions of <i>Trichinella </i><i>s</i><i>piralis</i> Infection with Dietary <i>Lactobacillus </i><i>p</i><i>aracasei </i>Supplementation","year":2006,"lang":"he","type":"article","venue":"Journal of Proteome Research","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Wellcome Trust","keywords":"Taurine; Lactobacillus paracasei; Internal medicine; Creatine; Biology; Choline; Probiotic; Glutamine; Endocrinology; Lactobacillus; Trichinella spiralis; Biochemistry; Immunology; Amino acid; Medicine; Helminths","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00240544,0.0005045513,0.0008400485,0.001536133,0.000313369,0.0001315058,0.0004618581,0.0001921463,0.0001106242],"category_scores_gemma":[0.0001264324,0.0004499611,0.0004797574,0.001292732,0.0004518009,0.0001684551,0.0001541061,0.001857826,0.0000142949],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003538303,"about_ca_system_score_gemma":0.001916561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003701083,"about_ca_topic_score_gemma":0.007236046,"domain_scores_codex":[0.9942704,0.001146948,0.002021447,0.0006322583,0.0009519429,0.0009770357],"domain_scores_gemma":[0.9962601,0.0001258246,0.001123662,0.0006072858,0.001436656,0.0004464714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004530112,0.002102581,0.009667399,0.0006283814,0.0002334078,0.00006176759,0.000390831,0.01797985,0.9610347,0.00008705771,0.002743769,0.0005401952],"study_design_scores_gemma":[0.01810761,0.005369242,0.03038519,0.00203986,0.0009862431,0.0008781549,0.001337208,0.00665398,0.8748901,0.0009412596,0.05642299,0.001988175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881771,0.003426214,0.003151469,0.002077821,0.0002776564,0.001734541,0.0008273285,0.000009178695,0.0003187146],"genre_scores_gemma":[0.9892328,0.00576824,0.00227234,0.0001126816,0.0006943577,0.00009077277,0.0003025825,0.00009910487,0.001427073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08614457,"threshold_uncertainty_score":0.9997952,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0514549131087788,"score_gpt":0.3720572739048303,"score_spread":0.3206023607960515,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}