{"id":"W2018252539","doi":"10.1128/jb.185.6.1935-1941.2003","title":"Mutational Analysis of the Residue at Position 48 in the <i>Salmonella enterica</i> Serovar Typhimurium PhoQ Sensor Kinase","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Histidine kinase; Mutant; Salmonella enterica; Response regulator; Phosphatase; Phosphorylation; Biochemistry; Autophosphorylation; Kinase; Molecular biology; Gene; Protein kinase A; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006167246,0.0001125452,0.0002905756,0.0001340735,0.00007247771,0.00001112859,0.0002666631,0.00009613543,0.00005039635],"category_scores_gemma":[0.0003100559,0.00006567126,0.0002478074,0.0003284365,0.0001802968,0.00000600651,0.00009212286,0.0001515993,0.000002268609],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004396378,"about_ca_system_score_gemma":0.00008894173,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001353919,"about_ca_topic_score_gemma":0.00008294374,"domain_scores_codex":[0.9983005,0.000754262,0.0004351893,0.0001433585,0.0001781889,0.0001885298],"domain_scores_gemma":[0.9990429,0.0000782343,0.0003861321,0.0002487112,0.0002098992,0.00003407214],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003484694,0.0000833321,0.03301455,0.000008544172,0.0004962988,0.00002729052,0.0001618152,0.0001746591,0.9647458,0.00003282796,0.0008757689,0.00003065665],"study_design_scores_gemma":[0.0008819237,0.0004660869,0.7723536,0.00001670201,0.0002779425,0.0004409848,0.0002941517,0.00002090743,0.2177312,0.00005771087,0.007339579,0.0001192523],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998191,0.0002734748,0.00005645269,0.0009741522,0.0001595099,0.00009478306,0.00003367413,7.807598e-7,0.0002161651],"genre_scores_gemma":[0.9989495,0.000186201,0.0002536418,0.000375631,0.00008463299,0.000004530697,0.00002776966,0.000007378624,0.0001107343],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7470146,"threshold_uncertainty_score":0.2677996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0104090357151252,"score_gpt":0.2649527751276649,"score_spread":0.2545437394125397,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}