{"id":"W2018761272","doi":"10.1186/1753-6561-5-s7-o47","title":"Haploid transcriptome analysis reveals allelelic gene expression variants, co-expressed gene groups, and linkages between expression and copy number variation","year":2011,"lang":"en","type":"article","venue":"BMC Proceedings","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Genetics; Biology; Gene; Allele; Gene expression; Locus (genetics); Genetic variation; Copy-number variation; Regulation of gene expression; Genetic architecture; Genome; Quantitative trait locus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001244027,0.0002056122,0.0003545232,0.0005429803,0.0002277363,0.0004542884,0.0001537196,0.0002553836,0.0008445185],"category_scores_gemma":[0.0001840013,0.0001927892,0.0002621533,0.0006364135,0.0001676142,0.0002596044,0.0002432941,0.0005365706,0.0004723474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002893393,"about_ca_system_score_gemma":0.0001341065,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006538199,"about_ca_topic_score_gemma":0.001428046,"domain_scores_codex":[0.9998891,0.000006585014,0.000007323842,0.00005515175,0.00003057628,0.00001122159],"domain_scores_gemma":[0.9997903,0.00005125739,0.00007965336,0.00002793319,0.00002476228,0.00002621387],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002740633,0.000004445041,0.002264149,0.00003095709,0.00001154879,0.00004100879,0.00002931012,0.0000799557,0.9956678,0.00007324082,0.00005509832,0.001715113],"study_design_scores_gemma":[0.00001889945,0.0001613612,0.6721008,0.00003555336,0.0001071436,0.001201318,0.0001991471,0.005450795,0.312418,0.001017109,0.007244942,0.0000448917],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9632353,0.002297246,0.02141425,0.0001005487,0.0000245324,0.00003418156,0.0111398,0.0002847979,0.001469374],"genre_scores_gemma":[0.9585677,0.001509651,0.02242298,0.0001809924,0.00001714558,0.00009335358,0.01505743,0.0001907334,0.001960101],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008445185,"threshold_uncertainty_score":0.002825141,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.018719419588411,"score_gpt":0.2532396651675498,"score_spread":0.2345202455791388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}