{"id":"W2018953200","doi":"10.1016/j.mcp.2014.11.001","title":"Sequence and secondary structure of the mitochondrial 16S ribosomal RNA gene of Ixodes scapularis","year":2014,"lang":"en","type":"article","venue":"Molecular and Cellular Probes","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Innovation Saskatchewan; University of Saskatchewan","keywords":"Biology; Ixodes scapularis; Genetics; Mitochondrial DNA; Gene; Ribosomal RNA; Nucleic acid sequence; Ribosomal DNA; Evolutionary biology; Phylogenetics; Borrelia burgdorferi","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006313059,0.0001568479,0.0002565414,0.00004526827,0.000104392,0.00001123557,0.000152838,0.0001771003,0.00008783265],"category_scores_gemma":[0.0000708631,0.0001147386,0.00009326678,0.00007476539,0.0004928791,0.00003885492,0.0001330136,0.0001727162,0.000001585679],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000062441,"about_ca_system_score_gemma":0.00004900713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001102955,"about_ca_topic_score_gemma":0.0000162741,"domain_scores_codex":[0.9990531,0.000246151,0.0002338901,0.0002465266,0.00004771828,0.0001726414],"domain_scores_gemma":[0.9994539,0.00003149955,0.0001412172,0.0002882982,0.00006166304,0.00002343076],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003446865,0.00003799708,0.005076472,0.00009254915,0.0001241557,0.000002490186,0.0001437975,0.00001129169,0.991817,0.001124082,0.00002802864,0.001507651],"study_design_scores_gemma":[0.0007054055,0.0001373304,0.004255498,0.00003075467,0.0001140939,0.00005733947,0.00002722287,0.000008078433,0.9917237,0.002339656,0.0004783126,0.0001226514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901459,0.00806963,0.001066114,0.00003780071,0.0002373766,0.0002217894,0.0000678127,0.00001586142,0.0001377289],"genre_scores_gemma":[0.9995426,0.00002405973,0.0002475028,0.00005736316,0.00002158037,0.000004401254,0.0000318633,0.00001439719,0.00005625441],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009396691,"threshold_uncertainty_score":0.4678905,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004264944456161956,"score_gpt":0.1908109300753894,"score_spread":0.1865459856192274,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}