{"id":"W2019134908","doi":"10.1371/journal.pone.0031785","title":"PrionHome: A Database of Prions and Other Sequences Relevant to Prion Phenomena","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Occupational Cancer Research Centre; McGill University","funders":"Medical Research Council; Wellcome Trust","keywords":"Fungal prion; Biology; Pseudogene; Computational biology; Genetics; Mendelian inheritance; Organism; Scrapie; Prion protein; Saccharomyces cerevisiae; Database; Genome; Yeast; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001095384,0.001655789,0.001865698,0.01157007,0.001166912,0.002366037,0.001528367,0.001515505,0.02333414],"category_scores_gemma":[0.004824215,0.0007085449,0.0008122915,0.01620397,0.0004264338,0.002538408,0.001945336,0.001560769,0.02379462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006491805,"about_ca_system_score_gemma":0.002622699,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002566424,"about_ca_topic_score_gemma":0.004278453,"domain_scores_codex":[0.9992239,0.0001062494,0.0002459421,0.0001758039,0.0001793117,0.0000687554],"domain_scores_gemma":[0.9977084,0.0006729058,0.0004289545,0.0003018158,0.0004507089,0.0004370419],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004381106,0.0006432505,0.02267731,0.052585,0.0006197955,0.003986907,0.002198831,0.002701796,0.1114363,0.009636082,0.5899735,0.1991602],"study_design_scores_gemma":[0.0004024495,0.0003244207,0.03381916,0.002393197,0.0003558794,0.002321737,0.0005865076,0.001932489,0.01242468,0.004576656,0.9406662,0.0001966713],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.01190561,0.004184256,0.003312463,0.0001237236,0.000076938,0.0002111235,0.971604,0.004212716,0.004369],"genre_scores_gemma":[0.00438377,0.00155191,0.007058041,0.00005940978,0.00001783047,0.0001267247,0.9858915,0.0002960085,0.0006148109],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.02333414,"threshold_uncertainty_score":0.07806051,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03925722860631582,"score_gpt":0.2620764012923945,"score_spread":0.2228191726860787,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}