{"id":"W2019197788","doi":"10.1021/ac500447w","title":"Cytosine DNA Methylation Is Found in <i>Drosophila melanogaster</i> but Absent in <i>Saccharomyces cerevisiae, Schizosaccharomyces pombe</i>, and Other Yeast Species","year":2014,"lang":"en","type":"letter","venue":"Analytical Chemistry","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":249,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Alberta Water Research Institute; European Research Council; Wellcome Trust; Wellcome","keywords":"Schizosaccharomyces pombe; Saccharomyces cerevisiae; Chemistry; Yeast; Drosophila melanogaster; Schizosaccharomyces; DNA; DNA methylation; Genetics; Gene; Biochemistry; Biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003438595,0.0005437336,0.0006551479,0.0001157787,0.00004946462,0.000129659,0.0003189624,0.001171343,0.0001984976],"category_scores_gemma":[0.0001330216,0.0005409635,0.0001649139,0.0002335438,0.0001987734,0.00001089467,0.0001858973,0.0007984132,0.00001962716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005817078,"about_ca_system_score_gemma":0.00008011556,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007736196,"about_ca_topic_score_gemma":0.00003295074,"domain_scores_codex":[0.9972493,0.0001004523,0.0007212637,0.001004799,0.0003965553,0.0005276297],"domain_scores_gemma":[0.9988471,0.00007068065,0.0002684424,0.0006011685,0.00009323908,0.0001193763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001418449,0.0001716608,0.02504512,0.001405445,0.0002564284,0.0001338107,0.00009441388,0.00005333606,0.9124891,0.00004438928,0.05958909,0.0005753939],"study_design_scores_gemma":[0.001294881,0.000109286,0.003280013,0.0003567229,0.0001292643,0.00002590912,0.00004037925,0.000406657,0.3407357,0.0007230863,0.6518535,0.001044635],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9166706,0.006139215,0.0001634497,0.06014504,0.0001515583,0.0004667578,0.0002521239,0.0000292066,0.01598211],"genre_scores_gemma":[0.9319771,0.00119101,0.0002522074,0.05632411,0.003885556,0.00004353756,0.0009833738,0.0001446956,0.005198425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5922644,"threshold_uncertainty_score":0.9997042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02231415794321136,"score_gpt":0.2595795651677425,"score_spread":0.2372654072245312,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}